Gene Sked_31780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_31780 
Symbol 
ID8634811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3538957 
End bp3540417 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content75% 
IMG OID 
ProductFAD-linked oxidoreductase 
Protein accessionYP_003315908 
Protein GI269796453 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.546471 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAGCA TGAGGATCTC GCCCGGTCGG CGTCCCGCTC CCTGGACCAC CTGGGCGGGC 
ACGGCCCGGT GCCAGCCACG CGTCCTCGCG ACGCCCGGGT CGACCGACGC GCTGCGCGCC
CTGCTCCACG AGGCGGCCGA GCGCGGCGAG GGTGTCCGTG CCGTCGGGGC AGGCCACTCC
TTCACCGGGG CCGCGACGAC CTCGGGCACC ATGGTCAGCC TCGCCGGGCT CGGGCGCCGG
ACCGCGCCGG ACGGCCGGAC CGGGCGGTCC GAGGACGTCG AGGAGGTCGA GGAGGTCGTC
CCGCTCGCCG GCGGTGGGGC CCTCGTCACG GTCCGCGCGG GGATCGGCCT CCGGGCGCTC
AACCTCACGC TCGCACGGCA CGGCCTCGCG CTCGCCAACC TCGGCGACAT CGACCGGCAG
ACCCTCGCCG GAGCGCTCGG CACCGGCACC CACGGCACCG GCGCCCGGCA CACCGGGCTG
GCCGCCCAGG TGCGCGGCGT GCGCCTCATG ACGGCGGCGG GCGAGGTCGT CGACACGAGC
GCCGACACCC ACGGGGCGCT CTTCGAGGCG GCGAGGCTCG GTCTGGGCGC CGTCGGGATC
GTCCTCGCGG TCACCCTGCG CACGGTGCCC GCGTTCCGGC TCACGGCCCG CGAGGCACCC
CAGCCGCTCG ACGAGGTCCT CGAACGGCTC GACGGCCCCG GGAACCTCGT CGACGCCCAC
GACCACTTCG AGCTCTACTG GTTCCCGCAC ACCCGGCGCA CCCTCACCAA GCGCAACGAC
AGGGCAGAGC CTCTGGACGC GGACGGGGCC CCGGGCAGGG CTCGGGACCC GAGCGGACCG
GGCACGCGGA CGGTCGAGAC GGCGCGTCGG CTGTGGTCGA CGGGGCGCCG GTGGGTCGAC
GACGAGCTGC TCTCGAACGG GCTGTTCTGG GCGACGAACG AGCTGGCCAC CCTCGCCCCC
GGCCTCACGC CACGCATCAA CGCCGTCGCG TCCAGGGCGC TGGCGCCCCG CACCTACACC
GCGGCCTCGC ACGAGGTCTT CGTCTCGGCC CGCAGGGTCC GCTTCGCCGA GATGGAGTAC
GCCGTCCCGC GCGCCGACGT CGTCGAGGTG CTCCGCGAGG TCGACCGGTG GGTCGAGGCC
TCCGGGGTGC ACGTCCCCTT CCCGGTCGAG GTGCGCTTCG CCGCAGCCGA CGACGTGTGG
CTGTCGACCG CGCACGGCCG GGAGACCGCC TACGTCGCCG TGCACCAGTA CGTCCGGTTG
CCCCGCGACC GGTACTTCGC CGGGGCCGAG GCCATCTTCC GCGAGGCCCA GGGGCGCCCG
CACTGGGGGA AGCTCCACAC CCTCGACCGC GACGGTCTCG CAGCGCTCTA CCCGCGCCTC
GACGACTTCT GCGCGGTGCG CGACGCCTAC GACCCGGGCC GGCTGTTCGC CAACGCGTAC
ACGACGCGGC TCTTCGGCTG A
 
Protein sequence
MLSMRISPGR RPAPWTTWAG TARCQPRVLA TPGSTDALRA LLHEAAERGE GVRAVGAGHS 
FTGAATTSGT MVSLAGLGRR TAPDGRTGRS EDVEEVEEVV PLAGGGALVT VRAGIGLRAL
NLTLARHGLA LANLGDIDRQ TLAGALGTGT HGTGARHTGL AAQVRGVRLM TAAGEVVDTS
ADTHGALFEA ARLGLGAVGI VLAVTLRTVP AFRLTAREAP QPLDEVLERL DGPGNLVDAH
DHFELYWFPH TRRTLTKRND RAEPLDADGA PGRARDPSGP GTRTVETARR LWSTGRRWVD
DELLSNGLFW ATNELATLAP GLTPRINAVA SRALAPRTYT AASHEVFVSA RRVRFAEMEY
AVPRADVVEV LREVDRWVEA SGVHVPFPVE VRFAAADDVW LSTAHGRETA YVAVHQYVRL
PRDRYFAGAE AIFREAQGRP HWGKLHTLDR DGLAALYPRL DDFCAVRDAY DPGRLFANAY
TTRLFG