Gene Sked_31710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_31710 
Symbol 
ID8634804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3530716 
End bp3531549 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content76% 
IMG OID 
Producttrehalose-phosphatase 
Protein accessionYP_003315901 
Protein GI269796446 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATGC CCCTCTCCCC CGACCTCACC GACGCGCTGG CCACCTTCGT GGCCGGCCGC 
TCACCCGGGC ACCCGGTGCT CGTCGCGAGC GACTTCGACG GCGTCCTCTC GCCGCTGGTC
GACGACCCGT CGGCCTCGGC CCCCACCCCG GAGGCCACCG AGGCCCTCGG GCGGCTCGCG
ACGCTGCCCG CCTCCGACGT CCGGCTCGCC CTGGTGTCGG GACGCGACCT CGAGACCCTC
GCGACGCTCT CCCGGGCGCC GCTGGGCACC GAGCTGGTCG GCAGCCACGG CGCCGAGCAG
GGTGTCGTCG TGGGCACAGC CGGCCGGGAC GACGGAGACG AGCCAGCCAG CACCACGGTC
GAGGGGCACC CCTTCGCCCT CACCGACGAC GAGCGCAGCA GGCTCGACGC CGTGCGCAGC
GGCCTCGAGG CGATCGCCCA CGACGCCGAG GGCGCCTGGG TCGAGGACAA GCCCTCCGCC
GCGGTCCTGC ACACCCGACG CGCGGAGCCG GACCGGGCTG CGCGCGCCGG AGACGCGGCC
CGTGCGCTCG GGGCCCAGCA CGACGCCCAC ACGATGACCG GCAAGGACGT CGTCGAGATC
GCCGTGGTCG ACACCTCGAA GGGCGTCGCG CTCGTCCGCC TGCGTGACGA GCTCGACGCG
GCCGCGGTCC TCTACCTCGG CGACGACGTC ACCGACGAGC GCGCCTTCGA GGCGCTCTCG
TCGACCGACG TGACCGTCAA GGTCGGGCCG GGCGAGACCG TCGCCCGGTT CCGGGTCGAC
ACTGTCGAAG ACGCCGCGGC CGTGCTCGCC GAGGTCGCGC GGCTGCTCGC CTGA
 
Protein sequence
MTMPLSPDLT DALATFVAGR SPGHPVLVAS DFDGVLSPLV DDPSASAPTP EATEALGRLA 
TLPASDVRLA LVSGRDLETL ATLSRAPLGT ELVGSHGAEQ GVVVGTAGRD DGDEPASTTV
EGHPFALTDD ERSRLDAVRS GLEAIAHDAE GAWVEDKPSA AVLHTRRAEP DRAARAGDAA
RALGAQHDAH TMTGKDVVEI AVVDTSKGVA LVRLRDELDA AAVLYLGDDV TDERAFEALS
STDVTVKVGP GETVARFRVD TVEDAAAVLA EVARLLA