Gene Sked_31590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_31590 
Symbol 
ID8634792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3516549 
End bp3518183 
Gene Length1635 bp 
Protein Length544 aa 
Translation table11 
GC content67% 
IMG OID 
Productchaperonin GroL 
Protein accessionYP_003315890 
Protein GI269796435 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGA TCATTGCCTT CAACGAGGAG GCCCGTCGCG GCATGGAGCG TGGACTCAAC 
GTCCTCGCCG ACACCGTGAA GGTCACGCTC GGCCCCAAGG GTCGCAACGT CGTCCTCGAC
AAGAAGTGGG GCGCGCCCAC CATCACTAAC GATGGTGTGA GCATCGCCAA GGAGATCGAC
CTCGAGGACC CGTTCGAGCG CATCGGTGCC GAGCTCGTCA AGGAGGTCGC CAAGAAGACC
GACGACGTCG CTGGCGACGG AACCACCACC GCCACCGTCC TCGCCCAGGC GCTCGTGCGC
GAGGGCCTGC GCAACGTCGC AGCCGGCTCG AACCCGATCG CGCTCAAGCG CGGCATCGAG
AAGGCCGTCG AGGCTGTCAT CGAGCAGCTC CTCGTCGCCG CGAAGGACAT CGAGACCAAG
GAAGAGATCG CGGCCACCGC TGCCATCTCG GCCGGTGACA GCGCGATCGG CGAGCTCATC
GCCGAGGCGC TCGACAAGGT CGGCAAGGAA GGTGTCATCA CCGTCGAGGA GTCGAACACC
TTCGGCCTCG AGCTCGAGCT CACCGAGGGC ATGCGCTTCG ACAAGGGCTT CCTCGCCCGC
TACTTCGAGA CCGATGCCGA GCGTCAGGAA GCGGTCCTCG AGGACCCGTA CGTCCTGATC
GTCGAGTCGA AGATCTCGAA CGTCAAGGAC CTCCTGCCGC TGCTCGACCA GGTCATGAAG
GCCGGTCGCT CGCTGCTCAT CATCGCCGAG GACGTCGAGG GCGAGGCTCT TGCGACCCTC
GTGCTCAACA AGATCCGTGG CACCTTCAAG TCCGTCGCCG TCAAGGCTCC GGGCTTCGGC
GACCGCCGCA AGGCCATCCT CCAGGACATC GCGATCCTCA CCGGTGGCCA GGTCATCTCC
GAGACTGTCG GCCTCAAGCT CGAGACCGCC ACGCTCGACC TGCTCGGCCA GGCCCGCAAG
GTCGTCGTCA CGAAGGACGA GACGACCATC GTCGAGGGCT CCGGCGACGT CGACCAGATC
GCCGGTCGCG TCAAGCAGAT CCGTTCCGAG ATCGAGAAGT CGGACTCCGA CTACGACCGC
GAGAAGCTCC AGGAGCGCCT CGCGAAGCTC GCCGGTGGTG TCGCGGTCAT CAAGGCCGGC
GCCGCCACGG AGGTCGAGCT CAAGGAGCGC AAGCACCGCA TCGAGGACGC CGTGCGCAAC
GCCAAGGCAG CCGTCGAAGA GGGCATCGTC GCCGGTGGTG GCGTCGCTCT CATCCAGGCT
GGCAAGGTCG CGTTCGAGAC TGCCGCTCTC GTCGCCCTCG AGGGTGACGA GGCGACCGGT
GCGAACATCG TCCGCGCCTC GATCGACGCT CCGCTCAAGC AGATCGCGAT CAACGCCGGG
CTCGAGGGTG GAGTCGTGGC CGAGAAGGTC CGCAACCTCC CCTCCGGCCA GGGCCTCAAC
GCCGCGACCG GCGTGTACGA GGACCTGCTC GCGGCTGGTG TCAACGACCC GGTCAAGGTG
ACGCGCTCTG CTCTGCAGAA CGCTGCCTCG ATCGCGGCGC TGTTCCTCAC CACCGAGGCA
GTCGTGGCCG ACAAGCCCGA GAAGGCTCCG GCCATGCCGG GCGGCGACGG CGGCATGGGC
GGCATGGACT TCTGA
 
Protein sequence
MAKIIAFNEE ARRGMERGLN VLADTVKVTL GPKGRNVVLD KKWGAPTITN DGVSIAKEID 
LEDPFERIGA ELVKEVAKKT DDVAGDGTTT ATVLAQALVR EGLRNVAAGS NPIALKRGIE
KAVEAVIEQL LVAAKDIETK EEIAATAAIS AGDSAIGELI AEALDKVGKE GVITVEESNT
FGLELELTEG MRFDKGFLAR YFETDAERQE AVLEDPYVLI VESKISNVKD LLPLLDQVMK
AGRSLLIIAE DVEGEALATL VLNKIRGTFK SVAVKAPGFG DRRKAILQDI AILTGGQVIS
ETVGLKLETA TLDLLGQARK VVVTKDETTI VEGSGDVDQI AGRVKQIRSE IEKSDSDYDR
EKLQERLAKL AGGVAVIKAG AATEVELKER KHRIEDAVRN AKAAVEEGIV AGGGVALIQA
GKVAFETAAL VALEGDEATG ANIVRASIDA PLKQIAINAG LEGGVVAEKV RNLPSGQGLN
AATGVYEDLL AAGVNDPVKV TRSALQNAAS IAALFLTTEA VVADKPEKAP AMPGGDGGMG
GMDF