Gene Sked_31500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_31500 
Symbol 
ID8634783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3504823 
End bp3505521 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003315881 
Protein GI269796426 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0449001 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.618471 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCGT GGATCCGCAG CTGCCTGGCA GCCGGGGCGA CCGCGTCCCA GCCGGAGCTC 
CGCTCGACCG GGCTCGCGCT GCTCGACCGG TGGAGCGAGC CGACGCGGTT CTACCACACG
GTCAAGCACC TCGCCGACGT CCTCTCGCGG GTCGACGAGC TCGCCGAGGA GACGCACGAG
CCCGACCTCG TCCGGCTGGC CGCCTGGTAC CACGGGGCCA TCTTCAACGC CGAGGCCCGG
GTCGCGTACG CGAGCCAGGG CGGTGAGGAC GAGGTCGCGA GCGCGGCCCT CGCCCGCGCC
GAGCTCGTCG ACCTCGGGGT GAGCGAGAAG CACGCCACGC GCGTCGCGGA CCTCGTCACC
GCGATGGCCC GCCACAAGCC GGCCCCCGGC GACTTCGACT GCGCGGTCCT CTGCGACGCC
GACATGGCGA TCCTCGCGTC CGAGCCGCAG CGGTACTCCT GCTACGTCCG GGACATCCGC
AAGGAGTACG AGCACATCCC GGTGGACGAC TACCTCGCCG CGCGGCACCG CATCCTCACC
AAGCTCGTCG ACCGCAAGTC GCTCTTCGCG AGCCCGCTCG CCGCGTCCTG GGAGGACGCC
GCACGGCAGA ACCTGGCCGG TGAGCTCGCC CGGGTCGAGC GGGAGATCTC GAAGCGCGAG
GCCGGTTGCG CCGCGGGGTC GGCACCGCAG GACTCCTGA
 
Protein sequence
MTSWIRSCLA AGATASQPEL RSTGLALLDR WSEPTRFYHT VKHLADVLSR VDELAEETHE 
PDLVRLAAWY HGAIFNAEAR VAYASQGGED EVASAALARA ELVDLGVSEK HATRVADLVT
AMARHKPAPG DFDCAVLCDA DMAILASEPQ RYSCYVRDIR KEYEHIPVDD YLAARHRILT
KLVDRKSLFA SPLAASWEDA ARQNLAGELA RVEREISKRE AGCAAGSAPQ DS