Gene Sked_31380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_31380 
Symbol 
ID8634771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3488697 
End bp3489713 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content74% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003315869 
Protein GI269796414 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.56193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0993098 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGCTG CAACACTCCC CACCCCGGCG AAGCGCACCC GGACCGCGAA GCCCAAGGCC 
GACGCGGTCC TGGTCGACGC GGTCGACGTC GCGCTCGCCG CGGCGCGCGA GGCTGCCGAG
CACCCCGGGG ACGTCGGCGA TCACCTCGCC GCGACCATGG ACGCCGACAG GCTCGCCTCG
CACACCTTCG CGTGCACCAT GCGCGGCTAC CGCGGCTGGC ACTGGACCGT CACGGTCGCC
CGTGCGCCCC GCTCCAAGAC CGTCACCGTC TGCGAGGTCG AGCTGCTCCC CGGTGCCGAG
GCGATCCTCG CCCCCGAGTG GCTGCCCTGG TCGGAGCGGC TCCGCCCCGG AGACATCGGT
CCCGGCGACG TCCTGCCCTT CCGCGCCGAC GACCCGCGCC TCGAGCCCGG CTACACCCCG
ACCGGCGACG AGGAGGAGGA CCGCGTCGCG ATCGAGGAGC TCGCGCTCGC GCGCACCCGC
GTCCTCTCGG TCGACGGCAA GGACGAGGCC GCCCAGCGCT GGTACGCCGG CTCGCGCGGC
CCGACCACGC CCGGCGCCGT CCAGGCCGCG TCGGACTGCG GGTCCTGCGG GTTCCTGGTC
ATGCTGCAGG GCTCCCTCGG GCAGGTCTTC GGGGTCTGCG CGAACGAGTG GTCCGAGGAC
GACGGCCGCG TCGTCTCCCT CGACCACGGT TGCGGCGCGC ACTCGGAGAC GGACGTCGAG
CCGCACCCGA CCGACTGGCC GGCCGACGCC CCCGTCATCG ACGAGATGAG CGTGGAGATC
GTCGACCGCG GTGCTCAGAC GCCGGACGCG GCTGCGGGCG CCGAGGGCAC GAGCACGGAA
GACACGAGCA CGGAAGACAC GAGCGCAGAA GACGGCAGCG TGGAAGACGC GAGCACCGAA
GACGCGAGCA CCGACGTCTC CGAGCCTGTC GAGGCCGAGG CTCCTGCCGA GGACGTACCG
CCTGCTCAGG CCTCCTCCGA CGGTTCCGCG TCCGAGGAGT CGGTCGCCGG CGCGTGA
 
Protein sequence
MPAATLPTPA KRTRTAKPKA DAVLVDAVDV ALAAAREAAE HPGDVGDHLA ATMDADRLAS 
HTFACTMRGY RGWHWTVTVA RAPRSKTVTV CEVELLPGAE AILAPEWLPW SERLRPGDIG
PGDVLPFRAD DPRLEPGYTP TGDEEEDRVA IEELALARTR VLSVDGKDEA AQRWYAGSRG
PTTPGAVQAA SDCGSCGFLV MLQGSLGQVF GVCANEWSED DGRVVSLDHG CGAHSETDVE
PHPTDWPADA PVIDEMSVEI VDRGAQTPDA AAGAEGTSTE DTSTEDTSAE DGSVEDASTE
DASTDVSEPV EAEAPAEDVP PAQASSDGSA SEESVAGA