Gene Sked_31330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_31330 
Symbol 
ID8634766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3481246 
End bp3482673 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content71% 
IMG OID 
Productflagellar hook-associated protein FlgK 
Protein accessionYP_003315864 
Protein GI269796409 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0682409 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCT TCTCCGGACT GTCCACAGCG CTGTCGTCGC TCATCACCCA GCGCCAGGCG 
CTCGAGGTCG CTGGCCAGAA CCTCGCGAAC ATCAACACCC CCGGCTACAC CCGCCAGCGG
GTCGACATGC AGTCGGTCAG CGCCGGCCAG GGCGCGACGA TGTTCTCGCA GGGCAACCAG
GTCGGCAACG GCGTCCAGGC CGTCGGCGTC GCGCGCCTCG GCGACATCTT CATGGACGCC
CGCGTGCGCA CCACGTCGTC CTCGGCCGCC TACCTCGCCG CACGCACCGA CGCCTTCAAG
CGCCTCGAGT CGACGATCGC CGAGCCCGGC GCCAACGGCA TCTCGGCCGA CCTCGACAAG
CTCTGGGCCA GCTGGAGCGA CGTGGTGAAC TCCCCCACGA GCGACGCGGT CGGCGCGGTC
CTCCTCGAGA ACTCCGCAGC GGTCCAGCGC TCGATCTCGA CCGGCTACAC GGCCGTCGTG
ACCCAGTGGG ACCAGACCCG CAGCAAGGCC GAGTCGCTCG TCTCCGACGT GAACTCCGCA
GCCGCCTCGG TCGCGCTCCT CAACGAGCAG ATCCAGCAGA TCACCGTCTC GGGCGGCAAC
GCCAACGAGC TCATCGACCA GCGCAACGTC CTCACCACCG CGCTCTCCTC CCTCGCCGGC
GCCACGGTCC GCCTGCAGCC GAACGGCACG GCCGACGTCA ACATCGGCGG CAACCCGATC
GTCAGCGGCA GCAGCGCGCA GAAGCTCAAG CTCGTGGGCA GCCGCGAGAT GGTCGGCGCC
ACCGGGAACG AGGTCCGCGT CGAGTGGGAC CGCACGCCCG CCGGCACCCC GGCCCCCCTC
GAGGGCGGCC AGCTCGCCGG CGTGCTGAGC GTCCTCGCCC CGGCCAGCGG CGGAGCCGGC
GGCATGCTCG CCGAGGCGGC CGAGTCGTAC AACGTGCTCG CCACGAAGCT CGCGACCTCG
GTCAACACCC TGCACTCGGC CGGCGCCGAC CGCGCCGGCA CCACGGGCGT CGACTTCTAC
TCGCTCCCCA CCGACGGCAC CCCGGCGGCG CTGGGCCTGC GCGTGGCGAT CACCTCCCCG
AGCCAGATCG CCGTGCGCAA CCCCGCCAAC GGCGCCAACG ACACCTCGGT GGCCGACGCG
ATCGGCCAGC TCGGGGCGTC CAAGGACGGC CCCGACACCG TGTGGTCGAC CTTCGTGGTC
TCGACCGGCG TCAAGGCCAA GGCCGCGCTG CAGAGCGCGA CGGTCGCCGA GGCCGCACGC
CAGACGGCCG AGGGCCTCCA GCTCGCGCAG ACGAGCGTGG ACCAGGACGA GGAGAGCATC
AACATGCTCT CGTTCCAGCG CGCCTACCAG GGTGCCGCAC GTGTCATGAC AGCGGTCGAC
GAGATGCTCG ACCAGCTCAT CAACCGGACA GGAGTCGTCG GACGATGA
 
Protein sequence
MSTFSGLSTA LSSLITQRQA LEVAGQNLAN INTPGYTRQR VDMQSVSAGQ GATMFSQGNQ 
VGNGVQAVGV ARLGDIFMDA RVRTTSSSAA YLAARTDAFK RLESTIAEPG ANGISADLDK
LWASWSDVVN SPTSDAVGAV LLENSAAVQR SISTGYTAVV TQWDQTRSKA ESLVSDVNSA
AASVALLNEQ IQQITVSGGN ANELIDQRNV LTTALSSLAG ATVRLQPNGT ADVNIGGNPI
VSGSSAQKLK LVGSREMVGA TGNEVRVEWD RTPAGTPAPL EGGQLAGVLS VLAPASGGAG
GMLAEAAESY NVLATKLATS VNTLHSAGAD RAGTTGVDFY SLPTDGTPAA LGLRVAITSP
SQIAVRNPAN GANDTSVADA IGQLGASKDG PDTVWSTFVV STGVKAKAAL QSATVAEAAR
QTAEGLQLAQ TSVDQDEESI NMLSFQRAYQ GAARVMTAVD EMLDQLINRT GVVGR