| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_31280 |
|---|
| Symbol | |
|---|
| ID | 8634761 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 3474814 |
|---|
| End bp | 3476196 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | flagellar capping protein |
|---|
| Protein accession | YP_003315859 |
|---|
| Protein GI | 269796404 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.215819 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.292754 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCTGG CAGTCGACGG CATGATCAGC GGTCTCAAGA CCTCCGAGCT CATCAACCAG
CTCATGCAGG TCGAGGCGAT GCCCCAGACC ATGCTCAAGC AGAAGGTCAC CACGACCCAG
GCGTTCATCA CCGCCCTGCA GGGCCTCAAC ACCCGCGTGT CCTCGCTCGC GGACGTCGCC
AAGACGGCCG CGAAGCCCGA GTCCTGGCAG GCGACCACCG CGTCGTCGTC GGCGACCAGC
GTCAAGGTCA CCACGAGCGC CGGCTCCCAG CCCTCGACCC TGAGCTTCAC GGTCGACCGC
CTGGCCAAGC CCCAGACCTC GGTGAGCGCC GCCGTGACGG ACCTCGACTC CTACTTCCCG
GACGGCGTGC CCGAGAACCT CACCATCGTC TCCGGCCCAG CGTCCAAGCC CACGCTCGTC
ACGGTCGACC TCGCCGGCGT CACCGACCTC GCCGGGCTGG CCACCAAGCT CAACGCCGCC
GGCTCCGGCA TCACCGCGAG CGTGGTGAAG GTCTCCGCGA CCGAGTCGCG CCTGCAGATC
ACCGGGAAGT CGACGGGCGT CGACGGCGCC TTCGACATCC ACCGCGGGAA GGTCACCGCA
GAGGACCTCG CGGCCGGGGC GTCCGACCTC GTCGTCGACA GGTCCACGGC CCTGGTGCAG
GCGGTCGACG CCCAGATCAG CCTCTGGGAC GGCACCCCGG TCACCTCGGC GAGCAACACC
TTCAGCGACG TCCTCAAGGG TGTGAGCTTC ACGGTGTCGG CGGTCGAGGC GACCCCGGTC
ACCGTCACCA CCGTCCGCAA CGACGCGGCC CTGACCAAGC TCGCCTCCGA CCTCGTCGGG
TCGGTCGGGG TCGTCCTCTC CGAGATCGCG TCGCGGACCA GCACCACCAC GACGACCTCG
ACCGACGGCC GCACCGTGAT CGCCGGTGGC GTGCTCTCGG GCGACAGCGC GACCCGAGGC
ATCGGGCAGT CCATCACCAC GGCGCTGTCG TACCCGGTCG ACGGCATCTC GCCGTCCGAG
GTGGGCATCA CGCTCAACAA GGACGGCACC TTCACCTTCG ACCAGGCCAA GTTCACCGAG
GCGCTCGGCA AGGACCCGGA GAAGGTCCAG CGTGTCGTCT CCGGCCTGGG TGAGCGCGTC
GCCGACGCCT CGAAGCGGAT CTCCGACCCC ATCGACGGCA GCCTCACCCT CAAGGTCAAG
AGCCAGGAGT CGTTCAGCAA GGGGCTCACC GAGCAGGTCA GCGACTGGGA CCGTCGTCTG
GAGACCCGCA GGTCCGGCCT GCAGCGCACC TATGCCGCAC TCGAGGTCAC CCTCAGCGGG
CTGCAGTCCC AGTCGAGCTG GCTCGCCGGC CAGATCGGGT CGCTGCCGAG CTGGAACAGC
TGA
|
|---|
| Protein sequence | MSLAVDGMIS GLKTSELINQ LMQVEAMPQT MLKQKVTTTQ AFITALQGLN TRVSSLADVA
KTAAKPESWQ ATTASSSATS VKVTTSAGSQ PSTLSFTVDR LAKPQTSVSA AVTDLDSYFP
DGVPENLTIV SGPASKPTLV TVDLAGVTDL AGLATKLNAA GSGITASVVK VSATESRLQI
TGKSTGVDGA FDIHRGKVTA EDLAAGASDL VVDRSTALVQ AVDAQISLWD GTPVTSASNT
FSDVLKGVSF TVSAVEATPV TVTTVRNDAA LTKLASDLVG SVGVVLSEIA SRTSTTTTTS
TDGRTVIAGG VLSGDSATRG IGQSITTALS YPVDGISPSE VGITLNKDGT FTFDQAKFTE
ALGKDPEKVQ RVVSGLGERV ADASKRISDP IDGSLTLKVK SQESFSKGLT EQVSDWDRRL
ETRRSGLQRT YAALEVTLSG LQSQSSWLAG QIGSLPSWNS
|
|---|
| |