Gene Sked_31180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_31180 
Symbol 
ID8634751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3467510 
End bp3467944 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content75% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003315849 
Protein GI269796394 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000117117 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0549663 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCC CCTTCCGCCT CGCCGGGCTG CTGCGCTTCC GCAAGCTGCA GGAGGACCAG 
GCCGCGGCCG ACCTCGCCGT CGCGCACTCC GCGCGCCGCG CCGCGCTGCG TCGCCAGGAC
CTCGCCCAGG GCCAGCTCGC CGAGCACGGC TTCGACCCCG TCGAGGACAC CGGTGCGTGG
CTGTCCACCG TCGCGACCCG AGCCGCGCTG CGCGGGCTCG CCTCCGAGGC CGGCGCCGCG
TCCGAGCTCG CGAGCCTCGA GGTCGCCCGC CGCGAGGAGG CGTGGTCGCA GACCCGCCGC
CAGCTGGTCC CGCTCGAGAA GCTCGCGGAC AAGCACGCCG AGCGCGAGGC CGTCGAAGAC
CTCCGCCAGG AGCAGATCGT GCTCGACGAG ATCGGCTCGA GCTCCACCAC CGACGACCCG
AGGGACGAGT CATGA
 
Protein sequence
MSRPFRLAGL LRFRKLQEDQ AAADLAVAHS ARRAALRRQD LAQGQLAEHG FDPVEDTGAW 
LSTVATRAAL RGLASEAGAA SELASLEVAR REEAWSQTRR QLVPLEKLAD KHAEREAVED
LRQEQIVLDE IGSSSTTDDP RDES