Gene Sked_31160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_31160 
Symbol 
ID8634749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3465124 
End bp3466704 
Gene Length1581 bp 
Protein Length526 aa 
Translation table11 
GC content80% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003315847 
Protein GI269796392 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0211968 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.112875 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCC CGACAGTCCA GAGCGCGGGC GTGCGCGGTG CGCAGCCCGC CACGGGCGTG 
CGCAGCGCCT CGGCGTCGAG CGGCGACGCC TTCGCCGCGG CGCTCAGCCG CAGCGAGACG
GTCGAGCGTC GCCCGGCCGA GCGCCCCGCC CCACGGCAGG AGCCGGCCCA GCAGCGCCGC
CTCGACCCGA TCCAGGTGCG CCGCACCGAC CTCTCGGCCG GCCGCCCGAC GACGATCGCG
CAGCGCGACC GTCCCGGTGC CGACCTCGGT GTCACGCGAC CCCGCGGGGC GACGCCCGCG
TCGTCGGCGC AGACCCGGCA GGCCGACGGT GACGGCACGA CGACCGGAGC AGCGTCGAGC
AGCGCCACGT CGAGCAGCGC CACGTCCACC GGCGCTGTCT CGGTCGACGC CACCGGGACG
CCTGCGGGCG AGGCCTCCAC GGGTTCCTCC GCCGACACCG CGCAGACCAC CGACCCCGTC
GCCGCTCCGG CCGACGCCGC GGCGCTCCTC GCGCAGCAGC TCGCCGCGGC CGAGGCTGCT
GCCGGGCAGG TGCCTCAGGC CGGGCTCGTC CCCGTCGTCG AGCAGCCGGC GGTCGAGGCC
GACGGCGCTG CGCCCGCAGC CGAGCCGACG GCCGAGGTGG CCCTGCCCAC GGCGGCGGTC
GTCGCCGTGC TTGGGACGGC TGCTGCTCCC GCCGACGCGG CCGCTCCGGC CGTCCCGAGC
GGCTCGGCTG CCGCCACGGC CGACGCGACC ACGACGACGC CGGCTGCCGC AGGCGCGACC
GCCGCGGCGG TCGGGTCGAC CGCGGGCACC CCGACCACCC AGGTCGCCGC GGGCACCCCC
GTCGCACCGG GCGCCCCGAC CGCCGGGTCG ACCGCCACGA CCTCCGCGGT CGACGGTGCT
GCCGCCCAGG TCACCGTGTC GACCGCGCAG AGCGGCGCCG GCACGAGCGC GGACCTCGGT
CAGGAGGGCG GCGGCGCGAC CCGTACCGAC GGTGCCGCCG CGGCGGCGAC CAGCGCGCCG
ACCTCGTCGA CCGCGACCTC GAGCAGCTTC GCGCAGACCC TCGCCGGGCT CACCCCGACG
ACGCCCGCCG AGCGGGTGGC CGCCGCGCCG CCCGTCCCTG CCGCGGGTGC CGCCGCGCCG
TCGCTCGCCG AGCAGGTCCG CGGACCCGTC ATGGCGCTGC GGCACGCGGC ACCGGGGGAG
CACACGCTCA CCCTGCAGGT CACGCCCGAC TCGCTCGGCC CGGTCCAGGT GAAGGCGCAC
ATCGGTGCGG CCGGTGTCCG CATCGAGCTG CTCGGCGTGA CCGACGCCGG CCGCGACGGG
CTCCGTGCGC TGCTCACCGA CCTGCGCCGC GACCTCGCGG GCACCGGCAT GAACGCCTCG
CTCAGCCTCG CCGGAGACGG CGACAGGGCG CAGGGCGGGC TCGCGGGGGA GTGGGGTGGC
GGTCCGCAGG ACGGCCGCGG CCCGACCGCC CGCCCCGGGC TGCGTGCCGA CCCCGGCGCG
CTCGTCGCGG AGCTGCCCAC CGAGACCGCA CGACCCGCCG CACCGACCAC TGGCGCCACC
GGCGTCGACG TCCTGACCTG A
 
Protein sequence
MTTPTVQSAG VRGAQPATGV RSASASSGDA FAAALSRSET VERRPAERPA PRQEPAQQRR 
LDPIQVRRTD LSAGRPTTIA QRDRPGADLG VTRPRGATPA SSAQTRQADG DGTTTGAASS
SATSSSATST GAVSVDATGT PAGEASTGSS ADTAQTTDPV AAPADAAALL AQQLAAAEAA
AGQVPQAGLV PVVEQPAVEA DGAAPAAEPT AEVALPTAAV VAVLGTAAAP ADAAAPAVPS
GSAAATADAT TTTPAAAGAT AAAVGSTAGT PTTQVAAGTP VAPGAPTAGS TATTSAVDGA
AAQVTVSTAQ SGAGTSADLG QEGGGATRTD GAAAAATSAP TSSTATSSSF AQTLAGLTPT
TPAERVAAAP PVPAAGAAAP SLAEQVRGPV MALRHAAPGE HTLTLQVTPD SLGPVQVKAH
IGAAGVRIEL LGVTDAGRDG LRALLTDLRR DLAGTGMNAS LSLAGDGDRA QGGLAGEWGG
GPQDGRGPTA RPGLRADPGA LVAELPTETA RPAAPTTGAT GVDVLT