| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_31020 |
|---|
| Symbol | |
|---|
| ID | 8634735 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 3452866 |
|---|
| End bp | 3454926 |
|---|
| Gene Length | 2061 bp |
|---|
| Protein Length | 686 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | flagellar biosynthesis protein FlhA |
|---|
| Protein accession | YP_003315833 |
|---|
| Protein GI | 269796378 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAACC GCGACCTCGC CAAGCTGGCG GTACCCGTCG GGGTGGTCGG CATCGTGATG
CTGCTCGTCA TCCCGCTGCC CGCCTGGCTG CTCGACGTGC TCATCGTCGT CAACATCGTC
ATGTCCCTGG TCATCCTGCT GACGACCATG TACGTGCAGC GACCGCTCGA CTTCTCGGTC
TTCCCCTCGT TGATCCTCGT CGCGACGCTG TTCCGGCTCG GGCTCAACGT GGCCTCGACC
CGCCTCGTGC TCCGTGACGG CTACGCCGGC GAGGTCATCG ACGCCTTCGG GCACTTCGTG
GTCGGCGGCT CGCTCATCAT CGGGCTCGTC ATCTTCCTCA TCCTCGTGGT GATCCAGTTC
GTGGTCATCA CCAACGGTGC CGGGCGCGTG GCCGAGGTCG GCGCCCGCTT CACCCTCGAC
GCGATGCCCG GCAAGCAGAT GGCCATCGAC GCCGACCTCA ACTCCGGGCT CATCACCGAG
GACCAGGCGC GCCAGCGCCG CGCGGACGTC GCCGCCGAGG CCGACTTCTA CGGTGCGATG
GACGGTGGTT CCAAGTTCGT CAAGGGCGAC GCGATCGCCG GCATCATCAT CACCATCATC
AACCTGGTCG GCGGCATCGC GATCGGCATG ATGCAGCGCG GCATGGAGGT CGGCGAGGCC
GTCGAGACGT ACTCGCTGCT CACCATCGGC GACGGGCTCG TCACCCAGAT CCCCGCCCTG
CTGCTCTCGG TGTCCACCGG TCTCATCGTC ACCCGGGCCA CCGCCGACTC CGACCTCGGC
ACCTCGGCGT CCAAGCAGCT CTCGCAGTCC CGCAACTCGC TGCTCATCGC GGGCAGCGCC
GCGATCGCCC TCGCGCTCCT GCCCGGCATG CCCAAGCTGC CGTTCATCCT CGTCGGCGCC
TGCCTGCTGC TGGGTGCCCA GCGCATCAAG GCGCGCGACG CCAAGATCGC CAAGGACGCC
GAGCTCGACG CCGCCATCCG CGAGACCGTC GCCCCGGTGG CCGACACCCC CGAGAAGCTC
ATCGAGGACA TGCGGGTCTC CGCCCTCGAG ATCCTGCTCG CGCCCAACCT CGTCGACCTC
GTGAGCGCCG GCTCTGACGA CGACCTCCTC GCCCGCATCC GGGGCCTGCG CCGCAAGGTG
GCCCTCGACC TCGGGATCGT GGTCCCGCCG GTGCGCACCC GCGACTCGGT CGAGCTGCCC
GCGTCGACGT ACGTGCTGCG CATCTCCGGC GTCGAGGCCG CCCGCGGCGA GGTGCCGCCC
GGCCGGGTCC TCGCCCTCGG CGACGACCTC GGCTCGCTGC CCGGCACCGA GGTCCACGAG
CCCGTGTTCG GCCTCGCCGG CAAGTGGGTG CCCTCCGAGA TGCGCTTCGC CGCCGAGATG
ACGGGCGCGA CCGTCGTCGA CCGCGTGTCG GTGCTCATCA CGCACCTGTC GAACGTCATC
GTCAGCAACG CCGACAGGCT GCTGAGCCGC GAGGACGTCC GCGTGCTCAC GGAGGGCGTC
AAGCAGGTGA ACCCCGCGGT CGTCGACGAG CTCGTGCCGA ACCTGCTGAC GCTCGGCGAG
GTGCAGCGCG TGCTCCAGCG GCTGCTCACC GAGCAGGTCC CGGTCCGCGA CCTCGGACGC
ATCTACGAGG CGCTCACCCT GCGCGCCAAG ATCTCGACCG ACGCCGAGGG CCTCGTCGAG
GCCGCGCGCC TGCAGCTGGC CCCCGCGATC ACCGCCGCGC ACAGCCACGA GGGCGTGCTC
CGGGTCATGA CCCTCGAGCC GGTCCTCGAG CAGGCGCTGC TCGAGGGGCT GCGCCCGGGG
GAGCAGGGCA CCCAGATCCT GCTCGACCCG AACCGCCTCG AGGCCATGCT GCGGTCCTTC
GCCGCAGGCC GGGCCGCGGC CGAGAGCCAG GGCGTCGACG TGGTGCTCGT GTGCGCCCCG
GCGCTACGCC CCGCGCTGCG CTCCCTCGTG GCCACCCACC ACGGCGAGGC CCCCGTGATG
TCATACTCCG AGGTCACCGG ATCCGGTGTG AAGATCGAGG CTGTGGGGGT TGTCCGCGAT
GTCGAAGCGA TTGCTGCTTG A
|
|---|
| Protein sequence | MKNRDLAKLA VPVGVVGIVM LLVIPLPAWL LDVLIVVNIV MSLVILLTTM YVQRPLDFSV
FPSLILVATL FRLGLNVAST RLVLRDGYAG EVIDAFGHFV VGGSLIIGLV IFLILVVIQF
VVITNGAGRV AEVGARFTLD AMPGKQMAID ADLNSGLITE DQARQRRADV AAEADFYGAM
DGGSKFVKGD AIAGIIITII NLVGGIAIGM MQRGMEVGEA VETYSLLTIG DGLVTQIPAL
LLSVSTGLIV TRATADSDLG TSASKQLSQS RNSLLIAGSA AIALALLPGM PKLPFILVGA
CLLLGAQRIK ARDAKIAKDA ELDAAIRETV APVADTPEKL IEDMRVSALE ILLAPNLVDL
VSAGSDDDLL ARIRGLRRKV ALDLGIVVPP VRTRDSVELP ASTYVLRISG VEAARGEVPP
GRVLALGDDL GSLPGTEVHE PVFGLAGKWV PSEMRFAAEM TGATVVDRVS VLITHLSNVI
VSNADRLLSR EDVRVLTEGV KQVNPAVVDE LVPNLLTLGE VQRVLQRLLT EQVPVRDLGR
IYEALTLRAK ISTDAEGLVE AARLQLAPAI TAAHSHEGVL RVMTLEPVLE QALLEGLRPG
EQGTQILLDP NRLEAMLRSF AAGRAAAESQ GVDVVLVCAP ALRPALRSLV ATHHGEAPVM
SYSEVTGSGV KIEAVGVVRD VEAIAA
|
|---|
| |