Gene Sked_30930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_30930 
Symbol 
ID8634726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3440015 
End bp3441145 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content70% 
IMG OID 
Productmultiple monosaccharide-binding protein 
Protein accessionYP_003315824 
Protein GI269796369 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTCCT TCTCCCGCCC ACCCTCGCCG TCGCGCCTGA TCGCGCCGGC CGTCGTGCTG 
CTCCTCGCCG CACCGCTCGC CCTCGCAGGA TGCTCGACGG ACGCCGCCGG CGCCGACGGC
TCCCTCGTGG GCGTCGCGAT GCCGACGACC ACGTCGTTGC GGTGGATCGA GGACGGGGAC
AACCTCAAGG CGCAGCTCGA GGCCCTCGGG TACCAGGTCG ACCTGCAGTA CGCCGAGAAC
GACGTCCCCA CCCAGGTGGA CCAGCTCCAG TCGATGATCG ACGCCGGGGC GGACCTCCTC
GTGGTCGGGT CGATCGACGG CACGGCGCTC ACCGACCAGC TCGCGCAGGC GGCAGACGCC
GGCATCCCGG TCATCGCCTA CGACCGGCTC ATCCGGGAGT CACCGGACGT CGACTACTAC
GCGACCTTCG ACAACTTCCG CGTCGGCACC CAGCAGGCCA CCTCGCTGCT CCAGGGCCTC
GGGGTCCTCG ACGAGGCGGG CGAGCCGACC GGCGAAGAAG GGCCGTACAC GGTCGAGGTG
TTCGCCGGGT CGTCGGACGA CAACAACGCG ACGGTGTTCT ACGAGGGTGC CTTCAGCGTC
CTCCAGCCGT ACCTGGACTC GGGTGTGCTC GAGGTGCCGT CGGGCGAGAC GGACTTCGCG
ACCATCGCGA TCGAGGCGTG GGACGCCAAG GTCGGCGGCG AGCGCATGAC CCGCCTGCTC
GACAGCGTGT ACTCCGGCAC CGACCTGGTG ATCGACGGCG TCCTGTCCCC GTACGACGGC
ATCTCGATCG CCATCATCGA CGTCCTCAAG GGCGCGGGCT ACGGCACTGC CGCCCGGCCG
CTGCCCGTGG TCGTCGGGCA GGACGCCGAG GCGCCGTCGA TCAAGTCCGT GATCGCCGGC
GAGCAGTACT CGAGCATCTA CAAGGACACC CGCCAGCTCG CCGAGGTCAC CGTCGCCATG
GGCGACGCGC TCCTCAAGGG CACCGCGCCC GAGGTCAACG ACGTCACCTC GTACGACAAC
GGTGTCACGA CCGTCCCGAC CTACCTGCTC GCCCCCGTCG TGGTGACCGC CACGAACTAC
GAGTCGCTGC TGGTCGGCGG CGGCTACTAC ACCGAGGAGG ACCTGCGATG A
 
Protein sequence
MMSFSRPPSP SRLIAPAVVL LLAAPLALAG CSTDAAGADG SLVGVAMPTT TSLRWIEDGD 
NLKAQLEALG YQVDLQYAEN DVPTQVDQLQ SMIDAGADLL VVGSIDGTAL TDQLAQAADA
GIPVIAYDRL IRESPDVDYY ATFDNFRVGT QQATSLLQGL GVLDEAGEPT GEEGPYTVEV
FAGSSDDNNA TVFYEGAFSV LQPYLDSGVL EVPSGETDFA TIAIEAWDAK VGGERMTRLL
DSVYSGTDLV IDGVLSPYDG ISIAIIDVLK GAGYGTAARP LPVVVGQDAE APSIKSVIAG
EQYSSIYKDT RQLAEVTVAM GDALLKGTAP EVNDVTSYDN GVTTVPTYLL APVVVTATNY
ESLLVGGGYY TEEDLR