Gene Sked_30730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_30730 
Symbol 
ID8634707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3422604 
End bp3423437 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content68% 
IMG OID 
ProductABC-type polysaccharide/polyol phosphate export systems, permease component 
Protein accessionYP_003315805 
Protein GI269796350 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.364162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCA CCGACAACCC CACCACCGCG GCCACGTCGC TGCGGTCTGC CGTCTCCCTC 
GAGGTCCGGC CCGGCCGGCC GTCGCCGATC GAGAACACGC TCACCTTCGC GTGGCGCGCC
CTGCTGAAGA TCAAGCACGT GCCCGAGCAG CTCTTCGACG TGACGCTCAC CCCGATCATC
TTCACGCTGA TGTTCACGTA CCTGTTCGGC GGGGCGATCG CGGGCGACAC CTCCACCTAC
CTGCAGTTCC TGCTGCCCGG GATCCTCGTG CAGACCGTGC TGATCATCAC CGTGTACACG
GGGTTCACGC TCAACACGGA CATCACCAAG GGGGTGTTCG ACAGGTTCCG CTCGCTGCCC
ATCTGGCGTC CCGCGCCGAT CGTCGGCGCG CTCCTCGGGG ACACCGTCCG CTACACCATC
GCGTCGGTCA TCACGCTCGG CCTCGGGCTG ATCCTCGGGT ACCGCCCGGG CGGTGGCGTG
GCCGGCACGC TCGCCGCGAT CGCCCTGCTG CTCGTCTTCG CGTTCTCGCT CAGCTGGATC
TTCACGATCT TCGGGCTGCT GATGCGCACC CCCAACGCCG TCATGGGCGT GTCCATGCTC
ATCCTCATGC CGCTGACCTT CGCGTCCAAC ATCTTCGTCG ACCCGGCGAC GATGCCGTCG
GCGCTGCGCG CCTTCGTCGA CGTCAACCCG GTGACGCACC TCGTCACCGC GATCCGGGGC
CTCATGGGCG GCGGGGCAGC GTTCTCCGAC GTGGTGTGGG TGCTCGTGGC CTCGGCCGCG
CTGACCCTGG TGTTCGCGCC GATCACGATG CGGCTCTACC GGACCAAGAG CTGA
 
Protein sequence
MSTTDNPTTA ATSLRSAVSL EVRPGRPSPI ENTLTFAWRA LLKIKHVPEQ LFDVTLTPII 
FTLMFTYLFG GAIAGDTSTY LQFLLPGILV QTVLIITVYT GFTLNTDITK GVFDRFRSLP
IWRPAPIVGA LLGDTVRYTI ASVITLGLGL ILGYRPGGGV AGTLAAIALL LVFAFSLSWI
FTIFGLLMRT PNAVMGVSML ILMPLTFASN IFVDPATMPS ALRAFVDVNP VTHLVTAIRG
LMGGGAAFSD VVWVLVASAA LTLVFAPITM RLYRTKS