Gene Sked_30610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_30610 
Symbol 
ID8634695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3409295 
End bp3409789 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content65% 
IMG OID 
Productlarge conductance mechanosensitive channel protein 
Protein accessionYP_003315794 
Protein GI269796339 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0156749 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAACG TCCTGAACGG TTTCAAAGAA TTCATCATGC GTGGGAATGC CATCGACCTC 
GCGGTCGGTG TCATCATCGG TGCCGCGTTC AGCGCGGTCG TGGCCGCGAT CGTCGAGAAC
CTCTTCACGC CGCTCATCGC TGCGATCTTC GGAGAGCCGG ACCTCAGCTC TGTGCTGTCC
TTCACGATCA ACGGCGCCGC CTTCAGCATC GGCGCGGTGC TCAACGCGGT GATCAACTTC
CTCTTCGTGG CCATCGCCCT CTACTTCTTC GTGGTGCTGC CGCTCAACCA CCTGTCGAAG
CTCCGCAAGA AGGGCATCAT CGAGGAGCCC GAGGGCCCCT CAGAGGACGT CCTCATCCTC
ACGCAGATCC GCGACCTGCT CCTCGTCCAG AACGGTGGCC CCGCCACCGG CACCGCGTCC
GCACCGTCCA CCCCGGACGC ACCGACCACC GGCCCGCAGG CGCCGAAGAG CCCTCCGGCA
CCCCCGGTCG CCTGA
 
Protein sequence
MKNVLNGFKE FIMRGNAIDL AVGVIIGAAF SAVVAAIVEN LFTPLIAAIF GEPDLSSVLS 
FTINGAAFSI GAVLNAVINF LFVAIALYFF VVLPLNHLSK LRKKGIIEEP EGPSEDVLIL
TQIRDLLLVQ NGGPATGTAS APSTPDAPTT GPQAPKSPPA PPVA