Gene Sked_30580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_30580 
Symbol 
ID8634692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3404846 
End bp3407542 
Gene Length2697 bp 
Protein Length898 aa 
Translation table11 
GC content72% 
IMG OID 
Productpenicilin amidase 
Protein accessionYP_003315791 
Protein GI269796336 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0787437 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCCAAC GCCAGGTCGT CCTCCGTCGC TCGCTCGTCG CCGTCGCCCT CCTCGTGGTG 
GTCGCGCTGG TCGCGGCCGT GATCTCGACG GCCGTGCTGA CCCGGCGTCC GCTCCCCACG
ACCTCGGGCG AGCTGAGCGT CGCGGGCCTG AGCGCGCCGG TCACCGTGCA CCGCGACGCG
CAGGGTGTCC CCGACATCTA CGCGTCGACG CCGGACGACC TCTTCCTGGC GCAGGGCTAC
GTCCAGGCGC AGGACCGGTT CTTCGAGATG GACTACCGCC GCCACGTCAC CTCCGGGCGG
TTGTCGGAGC TGGTCGGTGA GAACGCCGAC GCCCTCGAGG CCGACAAGGT GATCCGCACC
TTCGGCTGGC GCGACGTCGC CGAGCAGGAG TGGGACATCC TCGACTCGGA CACCAAGAAC
CACCTCCAGG CCTACGCCGA CGGGGTCAAC GCCTACCTCG CGGAGCGCTC GACCTCGCAG
GTCGCGGTCG AGTACACGGT GCTCGGGCTG CAGGTGTCGG TCGAGGACCC GGAGCCGTGG
GAGCCGCTCG ACTCGCTCGC GTGGCTCAAG GCCATGGCGT GGGACCTCCG CGGCAACTAC
GACGACGAGC TCGCCCGCGC GCAGTCGCTC GTGACCATCC GTGACGTGTC CCGGGTGGAC
GAGCTCTTCC CGGCGTACCC CGAGTCGCTC AACGCCCCGA TCCTCACCGC GCAGGACGCC
GCCGCGAACA GCGTGGCGGT CGCCGACGCA GCAGCCGGCG CCGCAGCCGA CACTGCCGGC
ACTGCCGAGG GCGCAGCCGC CGACCCGGCA GTCGAACCAG CAGACGGCGG AGGTGCCGGG
CTCGCCGGCC CGACCGACGA CTCCGCCCAC CCGCTCGACC TGACCGACGC TGTCGTCGCC
GCGGCGGTCG ACTCCGCGGC CGAGGCGGTC GCGGCCGTCC CCGTGCTCGT CGGGAAGGGC
GAGGGCATCG GGTCGAACTC GTGGGTCGTC TCGGGCGAGC ACACCGCCTC GGGCAGCCCT
CTCCTCGCCA ACGACCCGCA CCTGGGGCTC GCGGCGCCGA GCATCTGGGC GCAGGTGGGT
CTGCACTGCT CGACGGTCGG GGACGACTGC CCCTTCGACG TCACCGGGTT CTCCTTCGCC
GGTTTCCCCG GCGTGATCAT CGGGCACAAC GCCGAGCTCG CCTGGGGCAT CACCAACCTG
GGGACCGACG TGACCGACTT CTTCGTCGAG CGCACCCAGC AGGACACCTA CCAGGTCGAC
GGCTCCTGGG AGGACATGAC CACCCGGACC GAGGTCATCA AGGTCGCCGA CGGGGACGAC
GTCACCCTCG ACGTCCGGTC GACCCGGCAC GGACCGATCA TCTCGGGCGT GCTCCCGGTC
TCGGCCGTCT CGGCCACCCC GAACGAGATC GTCGACGGGG TGCTGCGCTC CGGGAGCGAC
GGGTACGAGG TCGCGCTCGG CTGGACCGCT CTGACGCCGG GCCGGACGGC CGACGCGATC
TTCGCGATGA ACACCGCGAC GGACGCCGAG GACATCGCCG CGGCGGCTCG GCTCTTCGAG
GTGCCGGCGC AGAACATCGT CTTCGCGACC GTCGACGGGC ACATCGGCTA CCAGGCGCCG
GGGACGGTCC CGGTGCGCGG CGCGGTCGAC GGCGGTCTCC CGTCCGACGG GACGTGGCCC
AGGCCGGGCT GGGACAGCGC CTACGACTGG CAGGGCACCG TGGACCCGGC GACCATGCCG
TCGGTGCTCG ACCCCGCCGA GGGGTTCATC GTCGCCGCGA ACCAGGCGGT CGCCCCCGCC
GGTGCGGGGC CGTACCTCAC CTCGGACTGG GACTACGGCT ACAGGTCGCA GCGCATCCGG
ACGCTCATCG AGGAGCAGAT CGCCTCGGGG GTGCCCATGA CCGTCGAGGA CATGCACCGC
ATCCAGGCGG ACGACCGGAA CCCGTACGCG GAGGTGCTGG TCCCCGTCCT CCTCGAGCAG
GAGATCGAGA CGGAGTTCGA CCGGGGCGGC CAGGACCTGC TGCGCACCTG GGACTACTCG
CAGGACGCCG ACTCTGCCGC CGCCGCGTAC TTCGCCGCGG TATGGGCAGA GCTCCTGTCG
CTGACCTTCG ACGACGAGCT CTCGGACGTC GCGGCCGCGG ACGGCAGCGA CCGGTGGCTC
GAGGTGGTGC GCACCCACCT GGAGAACCCG ACCAGCCCGT GGTGGGACGA CCGCCGGACG
GCGAACGTCG TCGAGACCCG CGACGAGATC CTCCAGCAGG CGCTCGTGCG GGCTCGGTCC
GAGCTGACCG TCCGGATGGG CAGCGACCCG TCGTCGTGGC GGTGGGGCTC CCTGCACACG
CTCGAGCTCG AGCACCCCGT CCTCGGTGGC GAGTCGGTCC CCGGCATCGT CCGCGACTGG
GTCAACCCCG GCATGCTCGA GATGTCCGGT GGCTCGTCGA TCGTCAACGC GACCGCATGG
GACGCCTCGT CGGGGTCCTT CGCGGTCACC ACCGGGCCGT CGATGCGGGC CGTGATGGAC
CTCGGCGACC TCGACGCGTC CACCTGGGTC GTGGTGACCG GGACCTCGGG TCACCCGGCC
AGCGGGCACT ACGACGACCA GCTCGCGACG TGGGCGTCCG GAGGGTCTTA CCCCTGGCGG
TCCACGCGCG ACGCCGTCGA GGCCGCCTCG CAGGACGAGC TGACGCTCAC GCCGTGA
 
Protein sequence
MPQRQVVLRR SLVAVALLVV VALVAAVIST AVLTRRPLPT TSGELSVAGL SAPVTVHRDA 
QGVPDIYAST PDDLFLAQGY VQAQDRFFEM DYRRHVTSGR LSELVGENAD ALEADKVIRT
FGWRDVAEQE WDILDSDTKN HLQAYADGVN AYLAERSTSQ VAVEYTVLGL QVSVEDPEPW
EPLDSLAWLK AMAWDLRGNY DDELARAQSL VTIRDVSRVD ELFPAYPESL NAPILTAQDA
AANSVAVADA AAGAAADTAG TAEGAAADPA VEPADGGGAG LAGPTDDSAH PLDLTDAVVA
AAVDSAAEAV AAVPVLVGKG EGIGSNSWVV SGEHTASGSP LLANDPHLGL AAPSIWAQVG
LHCSTVGDDC PFDVTGFSFA GFPGVIIGHN AELAWGITNL GTDVTDFFVE RTQQDTYQVD
GSWEDMTTRT EVIKVADGDD VTLDVRSTRH GPIISGVLPV SAVSATPNEI VDGVLRSGSD
GYEVALGWTA LTPGRTADAI FAMNTATDAE DIAAAARLFE VPAQNIVFAT VDGHIGYQAP
GTVPVRGAVD GGLPSDGTWP RPGWDSAYDW QGTVDPATMP SVLDPAEGFI VAANQAVAPA
GAGPYLTSDW DYGYRSQRIR TLIEEQIASG VPMTVEDMHR IQADDRNPYA EVLVPVLLEQ
EIETEFDRGG QDLLRTWDYS QDADSAAAAY FAAVWAELLS LTFDDELSDV AAADGSDRWL
EVVRTHLENP TSPWWDDRRT ANVVETRDEI LQQALVRARS ELTVRMGSDP SSWRWGSLHT
LELEHPVLGG ESVPGIVRDW VNPGMLEMSG GSSIVNATAW DASSGSFAVT TGPSMRAVMD
LGDLDASTWV VVTGTSGHPA SGHYDDQLAT WASGGSYPWR STRDAVEAAS QDELTLTP