Gene Sked_30470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_30470 
Symbol 
ID8634681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3391246 
End bp3392094 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content74% 
IMG OID 
ProductABC-type cobalamin/Fe3+-siderophore transport system, ATPase component 
Protein accessionYP_003315781 
Protein GI269796326 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.216454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.855902 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCCTT CCTCCACCGG CTCCGGAGCA CCCGCCGAGC ACCCCTCGCT CGCCGGCTCC 
GACCTGTTCC TCGCCTACGA CCGGTCGACC GTCGTGCACG GCGCGTCGCT CGACCTCGTC
GCCGGGCGGG TCACCGCGCT CATCGGGCCC AACGGGTCCG GCAAGTCGAC CCTGCTGCGC
TCGCTCGCCC GCCTCCACCG CCCCACCTCG GGCACCGTGA GCCTGCCCGA CGCACCGGAC
GCCCTCGCGC TCAAGCCCAA GGACTTCGCC CGCCAGGTGA CCCTCCTGTC GCAGAGCCGC
CCGACCCCCA ACGGGGTCAC CGTCCGCGAC ATCGTCGGCT ACGGTCGCCA CCCCTACCAG
GCCCGCTACC GCCGCACCGA CGCCGACGGC CCCCGTGCCG TCGCCCACGC GATGGAGGTC
ACCGGGGTCA CCGGCATGGC CGACCGCGGC GTCGACGAGC TCTCCGGCGG CGAGCTGCAG
CGCGTCTGGC TCGCGACCTG CCTCGCCCAG GACACCGGCG TGCTCCTGCT CGACGAGCCC
ACCACCTACC TCGACCTGCG CTACCAGGTC GAGATCCTCG ACCTGGTGCG CGACCTCGCC
GACGACCACG GCGTCGCCGT CGGCGTCGTC CTGCACGACC TCAACCAGGC CGCAGCCGTG
GCCGACCACG TCGTCCTGCT CCGCAGCGGC GTCGTCCAGG CCTCCGGGTC CCCCGTCGAC
GTCCTCACCG CCGACCTGCT CAGCGAGACC TACGGCCTGC GCATCGACGT CAGCGTCGAC
CCGGCCACCG ACCTCGTCCG CACCGAGCCC GTCGGGCGCC ACACCACCCG TCGCACCCAG
CCCGCCTGA
 
Protein sequence
MKPSSTGSGA PAEHPSLAGS DLFLAYDRST VVHGASLDLV AGRVTALIGP NGSGKSTLLR 
SLARLHRPTS GTVSLPDAPD ALALKPKDFA RQVTLLSQSR PTPNGVTVRD IVGYGRHPYQ
ARYRRTDADG PRAVAHAMEV TGVTGMADRG VDELSGGELQ RVWLATCLAQ DTGVLLLDEP
TTYLDLRYQV EILDLVRDLA DDHGVAVGVV LHDLNQAAAV ADHVVLLRSG VVQASGSPVD
VLTADLLSET YGLRIDVSVD PATDLVRTEP VGRHTTRRTQ PA