| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_30400 |
|---|
| Symbol | |
|---|
| ID | 8634674 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 3381728 |
|---|
| End bp | 3382561 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | conserved hypothetical protein TIGR00096 |
|---|
| Protein accession | YP_003315774 |
|---|
| Protein GI | 269796319 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.295543 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.306388 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGGCC GCCTCATCCT TGCCGGGACA CCCATCGGGG ACGTGGAGGA CGCGTCACCG
CGTCTGCGAC GTCTCCTCGT CGAGGCCGAC GTCGTCGCGG CCGAGGACAC CCGACGGCTG
CACGCCCTCG CCGGGCGCCT CGAGCTGAAG ATGACCGGGA AGGTGCTCAG CTACCACGAG
CACAACGAGT CGGCCCGCGC CGACGAGCTC CTCGACGTCG TCGAGTCGGG CGGCACGGTG
CTCATCGTCA CCGACGCCGG CATGCCCTCG GTCTCCGACC CCGGGTACCG GGTCGTCACC
CGTGCCATCG AGCGCGGGCT CCCCGTGACG TCCGCCCCCG GACCCAGCGC CGTGCTCACC
GCGCTCGCGG TCTCGGGCCT GCCGACCGAC AGGTTCTGCT TCGAGGGCTT CCCCCCGCGC
AAGCCCGGCG AGCGCGCCCG GACCTTCGAG CTGCTGGCCG ACGAGCGCCG CACCATGGTG
TTCTTCGAGT CCCCGCACCG CGTCGACCAG ACCCTCGCCG CCATGGCGCA GGCCTTCGGC
GCCGACCGCC CCGCCGCCGT GTGCCGCGAG CTCACCAAGA CCTACGAGGA GGTCCTGCGC
GGAGGGCTCG GCGAGCTGGC CGAGACGGCC GCCCAGGAGC AGCTGCGCGG CGAGATCTCG
ATCGTCGTCT CCGGCGCCCC GCAGCGCGAG ACCGCCACGA CCGCCGAGCT CGTCGCCGAG
GTGCTGTCCC GCGTCGCCGG GGGAGAGCGC CTCAAGGAGG CCGTCGCCGG TGTCGCCGAC
GCCGCAGGCG TCCACAAGCG CGAGCTCTAC GCGGCGGCGC TCGCGGCGAA GTAG
|
|---|
| Protein sequence | MTGRLILAGT PIGDVEDASP RLRRLLVEAD VVAAEDTRRL HALAGRLELK MTGKVLSYHE
HNESARADEL LDVVESGGTV LIVTDAGMPS VSDPGYRVVT RAIERGLPVT SAPGPSAVLT
ALAVSGLPTD RFCFEGFPPR KPGERARTFE LLADERRTMV FFESPHRVDQ TLAAMAQAFG
ADRPAAVCRE LTKTYEEVLR GGLGELAETA AQEQLRGEIS IVVSGAPQRE TATTAELVAE
VLSRVAGGER LKEAVAGVAD AAGVHKRELY AAALAAK
|
|---|
| |