Gene Sked_30390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_30390 
Symbol 
ID8634673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3381103 
End bp3381717 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content75% 
IMG OID 
Productnicotinamidase-like amidase 
Protein accessionYP_003315773 
Protein GI269796318 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.33651 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.276356 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAG ACGCCGCGCA GAGCCTGCCG GGACAGCCCG GACCCGCACC CCGCCGCGCG 
CTGCTGGTAG TCGACGTCCA GCCGACCTTC TGCGAGGGCG GCGCCCTCGG GGTCGACGGC
GGCGACGCGG TCGCGCACGC CGTCGCAGGC TTCGCCGCCG CGCACCGCGC CGACTACGCA
CTCGTCGTGA CGACGCAGGA CTGGCACGTC GACCCGGGCG AGCACTTCGG CGACACCCCC
GACTACGTCG ACACCTGGCC GCCGCACGGT GTCGCCGGGA CCGCCGAGGC CGAGCTGCAC
CCGGCGCTCG CGGACCTCGC GCCCGACGTC TCGGTGAAGA AGGGCGAGTA CCAGGCCGCC
TACTCCGGCT TCGAGGGCGT CGACAGCGAG GGGCGCCTGC TCGCCGACGT GCTCCGCGAG
GCGCGCGTCG AGGCGGTCGA CGTCGTCGGG ATCGCGGAGT CGCACTGCGT CAAGGCCACG
GCGCTCGACG CGCTCCAGCT CGGGCTGGCG ACACGGGTCT TCACCGACCT CACCGTCCCG
GTGTCCCCCG AGCAGGGCTT TCAGGCCCGC GTCGACATGG CCGCAGCCGG CGTCGAGCTG
GTCGCCTCCG CCTGA
 
Protein sequence
MSTDAAQSLP GQPGPAPRRA LLVVDVQPTF CEGGALGVDG GDAVAHAVAG FAAAHRADYA 
LVVTTQDWHV DPGEHFGDTP DYVDTWPPHG VAGTAEAELH PALADLAPDV SVKKGEYQAA
YSGFEGVDSE GRLLADVLRE ARVEAVDVVG IAESHCVKAT ALDALQLGLA TRVFTDLTVP
VSPEQGFQAR VDMAAAGVEL VASA