| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_30340 |
|---|
| Symbol | |
|---|
| ID | 8634668 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 3373824 |
|---|
| End bp | 3375464 |
|---|
| Gene Length | 1641 bp |
|---|
| Protein Length | 546 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | methionyl-tRNA synthetase |
|---|
| Protein accession | YP_003315768 |
|---|
| Protein GI | 269796313 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.20854 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.265597 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCACG ACGAGACCGC AGCGCCCACC GGGACGCAGT CCTTCTACCT CACCACCCCG
ATCTACTACG TGAACGACGC CCCGCACATC GGGCACGCGT ACACGACGGT CGCGGGCGAC
GTCCTGACCC GCTGGCACCG CCAGCGCCAG GAGCGCGTCT GGTTCCTCAC GGGGACCGAC
GAGCACGGGC AGAAGGTCAT GCGCACCGCC GAGGCCAACG GCGTGACGCC GCAGGAGTGG
GCCGACCGCC TCGTCGAGTC GTCGTGGGAG CCGGTCCTCG AGACCCTCGA CGCCCGCAAC
GACGACTTCA TCCGCACCAC GCAGCCGCGC CACACCGAGC GGGTCCAGCG GTTCATCCAG
GACCTGCACG ACAAGGGCGA GATCTACGCG GGCTCCTACG AGGGTCCCTA CTGCGTGGGC
TGCGAGGAGT ACAAGCTCCC CGGTGAGCTG CTCGACGGCA CGGGGGAGTA CGAGGGCCTC
AAGCTCTGCC CGATCCACAG CCGCCCGGTC GAGATGCTCT CCGAGCAGAA CTACTTCTTC
AAGATGAGCG CCTACGCCGA CCGCCTCCTG GCGCTCTACG AGGAGCACCC GGAGTTCGTG
CAGCCGGCCA GCGCGCGCAA CGAGGTCCTC GCCTTCGTCA AGGGCGGGCT GCAGGACCTC
TCGATCTCGC GGAACACCTT CGACTGGGGC ATCCCCATCC CGTGGGACAC CTCGCACGTG
CTGTACGTGT GGTTCGACGC GCTGCTCAAC TACGCGACCG CCATCGGCCT CGACAGCGAC
GACGAGGCCG AGCGCGAGCG CTTCGCCTCC ACGTGGCCGG CCGACGTCCA CCTGGTCGGC
AAGGACATCC TGCGCTTCCA CGCGGTGATC TGGCCCGCGA TGCTCATGGC CGCGGGGCTC
CCGCTGCCCA AGACGGTCTT CGCGCACGGG TGGCTGCTCG TGGGCGGCGA GAAGATGAGC
AAGTCCAAGC TCACCGGCAT CGCCCCGACG CAGATCACCG ACGTGTTCGG CTCGGACGCC
TTCCGCTACT ACTTCATGCG GGCCATCCCC TTCGGGCAGG ACGGCTCGTT CTCGTGGGAG
GACCTCTCGG CGCGCTACAA CGCCGAGCTC GCCAACGGCT TCGGCAACCT CGCCTCGCGC
GTCGCCGCCA TGATCTCGAA GAACTTCGGC GGCTCGCTCC CGCGCCCCGG CTCCTCCGGC
GACGCCGAGA CCGCCCTCCA GCAGGTCGCG GCGAAGGCCG TCGCCGAGGC CGAGGCCGCG
ATCGACCGCA TCTCGCCCAA CGAGGCGATC AACGCGGTGT GGGCCCTCGT CGACGCCACG
AACCTCTACC TCACCGAGCA GGAGCCCTGG AAGGTCGCCA AGCTCCCGGG GGAGACCACC
GAGAGCGGCG CCGGCGTCGA GGGCGGGCGC CTGGCGACCA TCCTCGTGAC CGCCGCGGAG
GCGCTGCGCA CCCTCGCGGT GCTCCTCAAC CCGGTGGTGC CCAAGGCGGC AGAGGGACTG
TGGACGGCGC TCGGCGCCGA GGAGCCGCTC GGCCCGCTCG GTGCGCAGCC GGTGCAGACG
GCGGCCGAGT TCGGCCAGCT GCCCGCCGGC ACCCGTGTCA CCAAGGGCGC CTCGCTGTTC
CCGCGCCTCG ACGAGGTCTG A
|
|---|
| Protein sequence | MAHDETAAPT GTQSFYLTTP IYYVNDAPHI GHAYTTVAGD VLTRWHRQRQ ERVWFLTGTD
EHGQKVMRTA EANGVTPQEW ADRLVESSWE PVLETLDARN DDFIRTTQPR HTERVQRFIQ
DLHDKGEIYA GSYEGPYCVG CEEYKLPGEL LDGTGEYEGL KLCPIHSRPV EMLSEQNYFF
KMSAYADRLL ALYEEHPEFV QPASARNEVL AFVKGGLQDL SISRNTFDWG IPIPWDTSHV
LYVWFDALLN YATAIGLDSD DEAERERFAS TWPADVHLVG KDILRFHAVI WPAMLMAAGL
PLPKTVFAHG WLLVGGEKMS KSKLTGIAPT QITDVFGSDA FRYYFMRAIP FGQDGSFSWE
DLSARYNAEL ANGFGNLASR VAAMISKNFG GSLPRPGSSG DAETALQQVA AKAVAEAEAA
IDRISPNEAI NAVWALVDAT NLYLTEQEPW KVAKLPGETT ESGAGVEGGR LATILVTAAE
ALRTLAVLLN PVVPKAAEGL WTALGAEEPL GPLGAQPVQT AAEFGQLPAG TRVTKGASLF
PRLDEV
|
|---|
| |