| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_30250 |
|---|
| Symbol | |
|---|
| ID | 8634659 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 3362544 |
|---|
| End bp | 3364262 |
|---|
| Gene Length | 1719 bp |
|---|
| Protein Length | 572 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | ATPase component of ABC transporters with duplicated ATPase domain |
|---|
| Protein accession | YP_003315759 |
|---|
| Protein GI | 269796304 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.24394 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGTCG GGGTGAACGA GGGCGACCGC GTGGGGATCG TGGGTCGTAA CGGCGACGGC
AAGTCCTCGC TGCTCGCGAT GCTCTCCGGC CGCCTCGAGC CCTCCGGCGG ACGCGTCACC
GTGCGCAACG GCACCCGCGT CGGTGTCCTC GACCAGGGCG ACACCCTCGA CCCGACCCGG
ACCGTCTCCG AGTCGATCGT CGGCTCGACC CCCGAGCACG AGTGGGCTGG CGACCCGAAG
GTCCGCGACG TCATCGCCGG GCTCGTCACC GACCTGCCGT GGGACGGCCT CGTCGGCGAG
CTCAGCGGAG GCCAGCGCCG CCGCGTCGCG CTCGCCGCGC TGCTGGTGGG CGACGACGAC
CTGCTGTTCC TGGACGAGCC CACCAACCAC CTCGACGTCG AGGCCATCAC CTGGCTCGCG
GGGCACCTGC GCACCCGGTG GTCCGCCAAC GCCGGAGGCC TCCTGGTCGT GACCCACGAC
CGCTGGTTCC TCGACGAGGT CTGCACCGCG ACCTGGGAGG TGCACGACGG CATCGTCGAG
CCCTTCGAGG GCGGGTACGC GGCGTACATC CTGCAGCGCG TCGAGCGCGA CCGGATGTCG
GCCGCGACCG AGGCCAAGCG TCAGAACCTC ATGCGCAAGG AGCTCGCGTG GCTGCGCCGC
GGCGCCCCGG CCCGCACCTC CAAGCCCAAG TTCCGCATCG ACGCCGCGAA CGAGCTCATC
GCGAACGAGC CTCCCGTGCG CAACTCGGTC GAGCTCGCGC AGATGGCCAC CTCGCGCCTC
GGCAAGGACG TCGTCGACCT GGTCGACGTC TCCGTGAGCT TCGGCGAGAA GCAGGTGCTC
AAGGACATCA CGTGGCTCAT CGGGCCCGGC GAGCGCACCG GGATCCTCGG CATGAACGGC
GCCGGCAAGT CCACGCTGCT CTCGCTGGTG ACCGGAGACC TCCAGCCGAC GACCGGTCGC
GTCAAGCGCG GCAAGACCGT CAAGGTCGCC ACCCTCACCC AGCAGCTCGC CGAGCTCGAG
GACATCGCGA AGGACCGCGT GAGCGACGTC ATCGCCCGGT ACCGGACGTC GTACGTCGCG
GGCGGCAAGG AGATGACCCC GGGGCAGCTC CTCGAGCGCC TCGGGTTCAC CGCCGTGCAG
CTCGCCACCC CGGTCAAGGA CCTCTCGGGT GGTCAGCGCC GCCGGCTCCA GCTGCTGCTC
ATCCTGCTCG ACGAGCCCAA CGTGCTCATC CTCGACGAGC CCTCGAACGA CCTCGACACC
GACATGCTCG CCGCCATGGA GGACCTGCTG GACTCGTGGC CCGGGACGCT GCTGGTCGTC
TCGCACGACC GGTACCTGCT CGAGCGGGTC ACCGACCAGC AGTACGCGAT CCTCGACGGC
GCGTTCCAGC ACGTGCCCGG GGGCGTCGAC CAGTACCTCA CGATCATGGC CGACCGCGCC
CCGACCGGTC GGCGCCCCAC GCCCACGAGC TCGCAGGGCG GCGGCTCGTC CGCACCGTCG
AGCGCCGAGG CGCGCGCCGC CAAGAAGGAG CTGGGTGCGG TCGAGCGCAA GCTCACCAAG
CTCACCGACC AGATCGCCGG GGTGCACGCC TCGATGGCCA CCCACGACTC GAGCGACTTC
ACCGGGCTCC GTGAGCTCGA CGAGAGGCTG CGCGCGCTCG GCGCCGAGGT CACCGAGCTC
GAGGAGCGCT GGATGGCGCT CGCGGAGCAG GCCGGCTGA
|
|---|
| Protein sequence | MTVGVNEGDR VGIVGRNGDG KSSLLAMLSG RLEPSGGRVT VRNGTRVGVL DQGDTLDPTR
TVSESIVGST PEHEWAGDPK VRDVIAGLVT DLPWDGLVGE LSGGQRRRVA LAALLVGDDD
LLFLDEPTNH LDVEAITWLA GHLRTRWSAN AGGLLVVTHD RWFLDEVCTA TWEVHDGIVE
PFEGGYAAYI LQRVERDRMS AATEAKRQNL MRKELAWLRR GAPARTSKPK FRIDAANELI
ANEPPVRNSV ELAQMATSRL GKDVVDLVDV SVSFGEKQVL KDITWLIGPG ERTGILGMNG
AGKSTLLSLV TGDLQPTTGR VKRGKTVKVA TLTQQLAELE DIAKDRVSDV IARYRTSYVA
GGKEMTPGQL LERLGFTAVQ LATPVKDLSG GQRRRLQLLL ILLDEPNVLI LDEPSNDLDT
DMLAAMEDLL DSWPGTLLVV SHDRYLLERV TDQQYAILDG AFQHVPGGVD QYLTIMADRA
PTGRRPTPTS SQGGGSSAPS SAEARAAKKE LGAVERKLTK LTDQIAGVHA SMATHDSSDF
TGLRELDERL RALGAEVTEL EERWMALAEQ AG
|
|---|
| |