Gene Sked_30210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_30210 
Symbol 
ID8634655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3358936 
End bp3359916 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content73% 
IMG OID 
ProductABC-type uncharacterized transport system, ATPase component 
Protein accessionYP_003315755 
Protein GI269796300 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.816797 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.132168 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACCC TGGAGATCGA CAACCTCTCC AAGTCCTACG GGTCGCTCCG CGCGCTCGAC 
TCGATGTCCT TCTCGGTCGC CTCCGGCGAG ATCTTCGGAT TCGTCGGCTC GAACGGCGCC
GGCAAGTCGA CGACGATGCG TATCGCGCTC GGCGTCCTGG CCGCCGACTC GGGCGAGGTG
CGCTGGGACG GCGCACCCCT CGACGTCGCG GCGCGTCGCG CCGTCGGCTA CATGCCCGAG
GAGCGCGGCC TCTACCCCAA GATGAAGGTG GGCGAGCAGC TCGTCTACCT CGCCCGCCTG
CACGGCCTGA GCCCGAAGGC CGCGACGGCT GCGATGGAGC TGTGGACCGA GCGGCTCGGC
GTCGCCGCGC GCCGCGACTC CGACGTGCAG TCCCTGTCGC TCGGCAACCA GCAGCGCGTG
CAGCTCGCGG CCGCCCTGGT GCACGACCCG GAGATCCTCG TCCTCGACGA GCCGTTCTCG
GGCCTGGACC CGGTCGCGGT CGACGTGATG AGCGGGGTGC TGCGCGAGAA GGCGGACCAG
GGCGCGCCCG TCGTCTTCTC GTCGCACCAG CTCGAGCTGG TCGAGCACCT CTGCGACCGC
GTCGGCATCG TCCGGGCCGG TCGGATGGTC GCGTCCGGCA CGGTCGACGA GCTCCGCTCG
AACGCCGCCC CGCGCTGGCT GGTCGACGCA CCAGACGCCC CTGCGGGCTG GGCGTCGGCG
ATCCCGGGGG TCACGCACGT GCAGACCACC GGGTCGCGGA CGGTCGTCGA GGTCGGCCGG
GCGCAGGGCG CCGAGCAGGC CGTCCTGCAG GCGGCGCTCG CCACCGGCAC CGTGCGCGAG
TTCGCACCCC AGCGCGCGAG CCTCACCGAC CTGTTCCGCG ACGTGGTGAG CGCCGAGCCC
GCGGCCGGCG ACACCCCGGA CACCACCTCG ACGACGAAGA AGAGCAAGCG GTCGTTCCTG
AGCAAGGGAT CAGCAGCATG A
 
Protein sequence
MPTLEIDNLS KSYGSLRALD SMSFSVASGE IFGFVGSNGA GKSTTMRIAL GVLAADSGEV 
RWDGAPLDVA ARRAVGYMPE ERGLYPKMKV GEQLVYLARL HGLSPKAATA AMELWTERLG
VAARRDSDVQ SLSLGNQQRV QLAAALVHDP EILVLDEPFS GLDPVAVDVM SGVLREKADQ
GAPVVFSSHQ LELVEHLCDR VGIVRAGRMV ASGTVDELRS NAAPRWLVDA PDAPAGWASA
IPGVTHVQTT GSRTVVEVGR AQGAEQAVLQ AALATGTVRE FAPQRASLTD LFRDVVSAEP
AAGDTPDTTS TTKKSKRSFL SKGSAA