Gene Sked_30040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_30040 
Symbol 
ID8634638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3336838 
End bp3337899 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content72% 
IMG OID 
ProductL-threonine aldolase 
Protein accessionYP_003315739 
Protein GI269796284 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCGCAT CCTTCGCCTC AGACAACTAC GCCGGTGCTC ACCCCGAGGT CTTCGCGGCC 
CTCACGGACG TCGCCTCCGG CCCCGCACGC GCCTACGGTG CGGACCCCTG GACGTCCCGG
CTCGGCGAGG TGGCGCAGCG CCACTTCGGT CAGCAGGCCC TGGTCTACCC GGTCTTCAAC
GGCACCGGCG CCAACGTCGT CAGCCTCATG TCGATGCTCC CGCGGTGGGG CGCCGTCGTG
ACCTCACGGC ACGCGCACAT CGAGAACGAC GAGAACGCCG CCCCCGAGCG CGTCGGCGGG
CTCAAGCTGC TCACGGTCGA CGCCCCGGAC GGCAAGCTCA CCCCGGCGAG CATCGACCAG
CAGGCCTGGG GGTGGGGCGA CCAGCACCGC GCGCAGCCGC TCGCCGTCTC GCTCACCCAG
TCGACCGAGC TCGGGACGGT CTACACCCCC GACGAGCTCC GGGCGATCAC CAGCCACTGC
CACGAGCGCG GCATGCGCGT CCACATGGAC GGCGCCCGCC TCGCCAACGC CGCCGCGTCG
CTCGGGACGA GCCTGCGCGA GATCACCACC GACGTCGGGA TCGACGTGCT GTCCTTCGGC
GGGACCAAGA ACGGGCTGGT CTTCGGGGAG GCCGTCGTGG TGCTCGACCC GACCGCCGTC
GACGGCGTCG ACTACGTCCG CAAGATGACC ATGCAGCTCG CCTCGAAGAT GCGCTTCGTG
TCCGCGCAGC TGCTCACCAT CCTCGACGGT GACCTCTGGC TGCGCTCGGC CGCCCGGGCC
AACGCGATGG CGCGACGGCT GCGCAGCCGG CTCGACCACA TGGTCGCCGA GGACCAGGCG
CCGGGCCTGC GCTTCTCGCA GCCGACCGAG GCCAACGGGC TGTTCGCCGT CCTCCCGCCC
GCCTCGGCCG AGCGCCTGCG CGAGGACTTC GCCTTCTACG ACTGGGACGC CGCCCGCGGC
GAGGTCCGGT GGATGTGCTC CTTCGACACC ACCGAGGAGG ACGTCGACAC CTTCGCCGAG
GCGGTCGGCC GCGAGCTCAG GGACGCTGCG GGCACCCGCT GA
 
Protein sequence
MLASFASDNY AGAHPEVFAA LTDVASGPAR AYGADPWTSR LGEVAQRHFG QQALVYPVFN 
GTGANVVSLM SMLPRWGAVV TSRHAHIEND ENAAPERVGG LKLLTVDAPD GKLTPASIDQ
QAWGWGDQHR AQPLAVSLTQ STELGTVYTP DELRAITSHC HERGMRVHMD GARLANAAAS
LGTSLREITT DVGIDVLSFG GTKNGLVFGE AVVVLDPTAV DGVDYVRKMT MQLASKMRFV
SAQLLTILDG DLWLRSAARA NAMARRLRSR LDHMVAEDQA PGLRFSQPTE ANGLFAVLPP
ASAERLREDF AFYDWDAARG EVRWMCSFDT TEEDVDTFAE AVGRELRDAA GTR