Gene Sked_30020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_30020 
Symbol 
ID8634636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3331148 
End bp3333850 
Gene Length2703 bp 
Protein Length900 aa 
Translation table11 
GC content72% 
IMG OID 
ProductPhosphoenolpyruvate carboxylase 
Protein accessionYP_003315737 
Protein GI269796282 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGACC TCCAGAACGC CTCGTCGAAC GACCTCCACG AGGCCACCCC CGACGACCGG 
GACGACGCGC GGGACGAGAT GCCGGAGAAG CTCCGCGCCG ACGTCCGCCT CCTCGGCGAC
CTGCTCGGCA CCATCCTCCG CGAGGCCGGC GGACCCGATC TGCTCGACGA CGTCGAGCGG
CTCCGCGGGC TCGTCATCAA AGCGAGGACC TCGCCGGAGT CCGGTGCGAT CGACGAGGCC
GAGACCCTCG TCGACACCTT CAGCCCCGAG CGCGCCGAAG AGGTCGCCCG CGCCTTCAGC
TGCTACTTCC ACCTCGTCAA CCTCGCCGAG GAGCACCACC GCGTGCGCGT GGTGCACCAG
CACGAGGCCG AGGTCTCGCC CGCCGAGGCG CAGGCTCAGG ACTACCTGCC CGACGCGCTG
AACCGCCTCG AGGCCGAGCT CGGGCCGGAC GAGACCCGCC GCCGGCTGGC CGGTCTCGAG
TTCCGCCCCG TCTTCACCGC CCACCCGACC GAGGCGCGAC GACGCGCCAT CGCCGCGTCG
ATCCGCCGGA TCACCACGCT GCTCGCCGCC CGTGACGACT CCTCGCTCGC CGGGGTGTCC
CGCCTGGAGA ACACCGACCA GCTGCTGGCC GAGATCGACG GCCTGTGGCG CACCTCGCCG
CTGCGCACCA CCAAGCCCTC GCCGCTCGAC GAGGTGCGCA CCGCGATGGG CGTCTTCGAC
GAGACCCTCT TCCGGGTCCT GCCCGAGGTC TACCGCCGGC TCGACAGCTG GGTGAACCGC
GACGAGCCCG GGATCTCGAC GCCCGTGGCG CCGCCCTTCG TGCGGCTCGG CACCTGGATC
GGCGGCGACC GCGACGGCAA CCCGAACGTC ACCGCGTCGA TCACCCGCAC CGCGGCGGCG
ATCGCGAGCG AGCACGTGCT CATCGCGCTC GAGAACGTGG CCGAGCGCGT GGGCCGAACC
ATGACCCTCG ACGCCACCAC GACGCCGGCC TCGGAGGCCC TCGACCAGCT GTGGCTCGCG
CAGCGCCAGC TGGCGCCGGA GATCACCGCG GACATCTCGA GCCGCTCCCC CAACGAGCCG
CACCGCCGGA CCCTCCTGGT CGTCGCCGAG CGGCTGCGCG CCACGCGTCG CCGGGACGCC
GACCTCGCCT ACCCCACGGC CGAGGACCTG CTCGCGGACC TCCAGACCAT CCAGGACTCG
CTCGTCGCGG CAGGCGCCCG CCGCGTCGCG TACTCGGACC TGCAGAAGTT CATCTGGCAG
GTGCAGACCT TCGGCTTCCA CCTCGCCGAG CTCGAGGTGC GACAGCACTC CCAGGTGCAC
CGCGAGACCC TCGCGGAGAT CGCCGAGCAC GGCGCGGACG GCCCCGGGCT CAGCGAGCGC
GCGGTCGAGG TGCTCGACAC CTTCCGGGCG ATCGCCGCGA TCCAGAAGCG CCACGGCGTG
GCCGCGGCCC GCCGCTACGT CGTGTCGTTC ACGACGAGCG CCGAGGACCT CGGCAACGTC
TACACGCTCG CGGCGCACGC GCTCGGCGGG CCCGAGCACA CGCCCGTGCT CGACGTCGTG
CCGCTCTTCG AGACCTTCGC GGACCTGCAG GCCGCACCCG GGGTGCTCGC CGAGTACGTC
GAGAACCCGC TCGTGGTCGA GCGCCTGGCG GCGACCGACC GGCGTCTCGA GGTCATGCTC
GGGTACTCCG ACTCCTCCAA GGACGTCGGC CCGGTGTCCG CGACCCTCGC GCTCTACGAG
GCGCAGGACA AGATCGCGGC CTGGGCACAG GCCGCAGACG TCACGCTGAC CCTGTTCCAC
GGCCGCGGTG GTGCTCTCGG CCGTGGCGGC GGCCCGGCGA ACCGCGCCGT GCTGGCCCAG
CCCCCGGGCT CGGTCGACGG ACGGTTCAAG CTCACCGAGC AGGGCGAGGT CATCGCCGCA
CGCTACGGCG ACCCGACCAT CGCGACGCGT CACATCGAGC AGGTCGCCGC GGCGACGCTC
CTGCAGTCGA TGCCGTCGGT CGGCGACCGC AACGCGCAGG CCGCAGAGCG CTTCACCGAC
GTCGCGGCGA CGCTCGACAC GGTCTCCCGC AAGCGGTTCT TCGAGCTCGT GCACGCCGAG
GGCTTCCCGG CGTGGTTCGC GCAGGTGACC CCGCAGGAGG AGATCGGGCT GCTGCCGCTC
GGCTCGCGAC CCGCCAAGCG TGGGCTGTCG GTCAACTCCC TCGACGACCT CCGAGCCATC
CCCTGGGTGT TCGCGTGGAC GCAGGCCCGC ATCAACCTCA CCGGCTGGTT CGGTCTCGGC
ACCGCCCTGG CGGCCGTGGG CGACCTCGAC GAGCTGAAGA CGGCCTACGA GCAGTGGCCG
CTGTTCTCGA CCATGATCGA CAACGTCGAG ATGTCGCTCG CCAAGACCGA CGTGCGGATC
GCCGAGCGCT ACCTCGCCCT GGGCGACCGT GACGACCTCG CGACGCTCGT GCTCGACGAG
ATGGCCGTGA CCCGCGAGTG GGTCCTCAAG ATCACCGGCA AGACGACGAT GCTCGGCAAC
CTCCACGTGC TCGGACGCGC CGTCCAGCTG CGCAGCCCGT ACGTCGACGC CCTCTCGCTG
ATCCAGCTGC GGGCGCTGCG CGCGCTGCGC AAGGGCGCTC CCGAGGACCA GGTGCCCCAG
CTGCAGCGTC TGCTCCTGCT GTCGGTCAAC GGGATCGCCG CAGGCCTCCA GAACACCGGG
TGA
 
Protein sequence
MTDLQNASSN DLHEATPDDR DDARDEMPEK LRADVRLLGD LLGTILREAG GPDLLDDVER 
LRGLVIKART SPESGAIDEA ETLVDTFSPE RAEEVARAFS CYFHLVNLAE EHHRVRVVHQ
HEAEVSPAEA QAQDYLPDAL NRLEAELGPD ETRRRLAGLE FRPVFTAHPT EARRRAIAAS
IRRITTLLAA RDDSSLAGVS RLENTDQLLA EIDGLWRTSP LRTTKPSPLD EVRTAMGVFD
ETLFRVLPEV YRRLDSWVNR DEPGISTPVA PPFVRLGTWI GGDRDGNPNV TASITRTAAA
IASEHVLIAL ENVAERVGRT MTLDATTTPA SEALDQLWLA QRQLAPEITA DISSRSPNEP
HRRTLLVVAE RLRATRRRDA DLAYPTAEDL LADLQTIQDS LVAAGARRVA YSDLQKFIWQ
VQTFGFHLAE LEVRQHSQVH RETLAEIAEH GADGPGLSER AVEVLDTFRA IAAIQKRHGV
AAARRYVVSF TTSAEDLGNV YTLAAHALGG PEHTPVLDVV PLFETFADLQ AAPGVLAEYV
ENPLVVERLA ATDRRLEVML GYSDSSKDVG PVSATLALYE AQDKIAAWAQ AADVTLTLFH
GRGGALGRGG GPANRAVLAQ PPGSVDGRFK LTEQGEVIAA RYGDPTIATR HIEQVAAATL
LQSMPSVGDR NAQAAERFTD VAATLDTVSR KRFFELVHAE GFPAWFAQVT PQEEIGLLPL
GSRPAKRGLS VNSLDDLRAI PWVFAWTQAR INLTGWFGLG TALAAVGDLD ELKTAYEQWP
LFSTMIDNVE MSLAKTDVRI AERYLALGDR DDLATLVLDE MAVTREWVLK ITGKTTMLGN
LHVLGRAVQL RSPYVDALSL IQLRALRALR KGAPEDQVPQ LQRLLLLSVN GIAAGLQNTG