Gene Sked_29880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_29880 
Symbol 
ID8634622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3318718 
End bp3319539 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content67% 
IMG OID 
Producttranscription antitermination protein nusG 
Protein accessionYP_003315724 
Protein GI269796269 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.574847 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.380825 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTCAGG AGTCGTTCGA ACCGACGGAG GAGATCGTCG ACGCCGTCGC GGGCGACGCT 
GAGAGCGCCG ACGCGGACGT CGCGGTCACC GAGCTCGACG ACCAGCCGAC CGAGGAGACC
GTCGCCGACG ACGAGACCTC GACCGACAGC GTCGACGACG AGGTCACCGA GAGCCCAGCC
GACGAGTCCG CCTCCGACGC CGAGGCGTCG GTCGACGACG AGGACGAGGA CCCGGTCGAG
TCCTTCAAGC GCGAGCTGCG CAGCAAGCCC GGCGACTGGT ACGTCATCCA CTCGTACGCC
GGCTACGAGA ACCGCGTGAA GGCGAACCTC GAGAACCGCA TCCAGAGCCT CAACATGGAG
GACTACATCT TCCAGATCGA GGTGCCGATG GAAGAGGTCA CCGAGATCAA GAACGCGCAG
AAGAAGATCG TCCGCCGCGT CCGGATCCCC GGCTACGTCC TCGTCCGCAT GGACCTCACC
GACGAGTCCT GGGGCGCCGT GCGTCACACC CCCGGCGTCA CCGGCTTCGT CGGCCACACC
CACCAGCCCG TCCCGCTGAC CCAGAACGAG GTCTTCGGGA TGCTCGCGCC CCTCATCGCC
CCCAAGGCAG AGGCCGGCGC CAAGGGCAGC GGTTCCGCCC CGGCGATCGA GGTCGACTTC
ACCGTCGGCG AGTCGGTCAC CGTCACGGAC GGACCCTTCG ACACGCTGCC TGCCACCATC
TCCGAGATCA ACGCCGAGGG CCAGAAGCTC AAGGTGCTGG TCTCGATCTT CGGCCGGGAG
ACCCCGGTCG AGCTGTCGTT CAGCCAGGTC GCCAAGATCT GA
 
Protein sequence
MSQESFEPTE EIVDAVAGDA ESADADVAVT ELDDQPTEET VADDETSTDS VDDEVTESPA 
DESASDAEAS VDDEDEDPVE SFKRELRSKP GDWYVIHSYA GYENRVKANL ENRIQSLNME
DYIFQIEVPM EEVTEIKNAQ KKIVRRVRIP GYVLVRMDLT DESWGAVRHT PGVTGFVGHT
HQPVPLTQNE VFGMLAPLIA PKAEAGAKGS GSAPAIEVDF TVGESVTVTD GPFDTLPATI
SEINAEGQKL KVLVSIFGRE TPVELSFSQV AKI