| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_29820 |
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| Symbol | |
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| ID | 8634616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | - |
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| Start bp | 3308042 |
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| End bp | 3311923 |
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| Gene Length | 3882 bp |
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| Protein Length | 1293 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | DNA-directed RNA polymerase subunit beta' |
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| Protein accession | YP_003315718 |
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| Protein GI | 269796263 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.759386 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTCGACG TCAATGTCTT CGACGAGCTG CGTATCGGAC TGGCCACGGC AGACGACATC
CGCACCTGGT CGCATGGCGA GGTCAAGAAG CCTGAGACCA TCAACTACCG CACCCTCAAG
CCCGAGAAGG ACGGACTCTT CTGCGAGAAG ATCTTCGGCC CGACCCGGGA CTGGGAGTGC
TACTGCGGCA AGTACAAGCG CGTGCGCTTC AAGGGCATCA TCTGTGAGCG CTGCGGCGTC
GAGGTGACGC GCTCGAAGGT GCGTCGCGAG CGCATGGGCC ACATCGAGCT CGCCGCTCCC
GTCACCCACA TCTGGTTCTT CAAGGGCGTG CCGTCCCGCC TCGGCTACCT CCTCGACCTC
GCGCCGAAGG ACCTCGAGAA GGTCATCTAC TTCGCCGCGT ACATGGTGAC GTCGGTCGAC
GTCGACGGCC GCCAGGAAGA CCTCCCGAAC CTCCAGAACG AGATCGACCT GGAGAAGAAG
GAGATCACCG ACCGTCGCGA CAACGACATC GAGACGCGCG CACGCCGCCT CGAGTCCGAC
CTCGCCGAGC TCGAGGCCGA GGGCGCCCGC GCCGACGCAC GCCGCAAGGT GCGCGACTCC
GCCGAGCGCG AGATGGCTCA GCTGCGCAAG CGTGCTGACG CCGAGCTCGA GCGCCTCGAG
CAGGTCTGGG ACAAGTTCAA GAACCTCAAG GTCGCCGACC TCGAGGGCGA CGAGATGCTC
TACCGCGCCC TCCAGGACCG CTACGGCAAC TACTTCGAGG GTTCGATGGG TGCCGCCGCG
ATCCAGAAGC GGCTGCAGGA CTTCGACCTC GACGCCGAGG CGACCTCGCT GCGCGAGATC
ATCCGCTCGG GCAAGGGCCA GAAGAAGACC CGTGCCCTCA AGCGCCTCAA GGTCGTCAAC
GCCTTCCTCA CGACGACCAA CTCGCCGACC GGCATGGTCC TCGACGCCGT CCCGGTCATC
CCGCCGGACC TGCGTCCGAT GGTGCAGCTC GACGGTGGAC GTTTCGCGAC GTCCGACCTC
AACGACCTGT ACCGCCGCGT GATCAACCGC AACAACCGCC TGAAGCGCCT CCTCGACCTC
GGTGCGCCCG AGATCATCGT CAACAACGAG AAGCGCATGC TCCAGGAGGC CGTGGACTCG
CTGTTCGACA ACGGTCGTCG TGGACGTCCG GTCACCGGGC CGGGCAACCG CCCGCTCAAG
TCGATCTCCG ACATGCTCAA GGGCAAGCAG GGTCGATTCC GCCAGAACCT CCTCGGCAAG
CGTGTCGACT ACTCGGGCCG TTCGGTCATC GTGGTCGGTC CGCAGCTCAA GCTGCACCAG
TGCGGCCTGC CGAAGCAGAT GGCGCTCGAG CTCTTCAAGC CCTTCGTCAT GAAGCGCCTC
GTCGACCTCA ACCACGCGCA GAACATCAAG AGCGCCAAGC GCATGGTCGA GCGCGCGAAG
TCTGCCGTGT GGGACGTCCT CGAAGAGGTC ATCACCGAGC ACCCCGTGCT GCTCAACCGT
GCACCCACCC TGCACCGCCT GGGCATCCAG GCCTTCGAGC CTCAGCTCGT CGAGGGCAAG
GCCATCCACC TGCACCCGCT CGTCTGCGCG GCGTTCAACG CCGACTTCGA CGGTGACCAG
ATGGCTGTCC ACCTGCCGCT GTCCGCCGAG GCCCAGGCCG AGGCGCGCAT CCTCATGCTC
TCGAGCAACA ACATCCTCAA GCCGTCCGAC GGTCGCCCGG TCACCATGCC CTCGCAGGAC
ATGATCATCG GTCTGTACCA CCTGACGAGC GACAAGGTCG ACCCGGTCGG CGAGGGACGC
GCGTTCAGCT CCGTCTCCGA GGCCGTCATG GCCTTCGACC AGGGCAGCCT GGACCTCAAC
GCGGTCGTCA CGATCCGCAT GGAGGGCCTC GTCCCGCCGG TCTCCGGCTT CGAGGCGCCC
GAGGGCTGGG TCGAGGGTGA GCCCATCCTC TTCACCACGA CGCTCGGCCG TGCGCTCTTC
AACGAGCTGC TGCCGGTCAC GTACCCGTAC GTCAACTCCG TCGTCGACAA GAAGCGCCTG
TCGCAGATCG TCAACGAGCT CGCCGAGACC TACCCCAAGG TCGAGGTCGC GGAGTCGCTC
GACGCGCTCA AGGCCGCCGG CTTCCGCTGG GCCACACGCT CGGGCATCAC CATCTCGATC
TCCGACGTCG CGACGCCGAA GGCCGAGAAG GCCGCCATCC TCGAGGCGCA CGAGTCCCGT
GCCCTCAAGG TGCAGCAGCA GTTCGACAAG GGACTGATCA CCGACGACGA GCGCCGCCAG
GAGCTCATCG AGATCTGGAC CCAGGCCACC GACAAGGTCG CGAAGGCGAT GCAGGAGAAC
TTCCCTGCAC GCAACACGGT CTACCGGATG GTCGGCTCGG GTGCTCGTGG TAACTGGATG
CAGGTCCGTC AGATCGCCGG TATGCGTGGT CTCGTGGCGA ACCCGAAGGG TGAGATCATC
CCTCGCCCGA TCAAGTCCAA CTACCGTGAG GGCCTCTCGG TCCTCGAGTA CTTCATCGCG
ACGCACGGTG CTCGTAAGGG TCTGGCCGAC ACGGCTCTGC GTACCGCAGA CTCGGGCTAC
CTGACCCGTC GTCTCGTCGA CGTCTCGCAG GACGTCATCG TCCGCGAGGA CGACTGCGGG
ACCGAGCGCG GTCTCACGCT CCCCGTGGGC GAGGACCTCG GCGACGGTCG CCTCGTGCGG
CACGGCAAGG TCGAGCAGAG CATCTACTCG CGCACCCTGG CCGCCTCGGT CGAGGTCGAC
GGGACCGTGC TCGGCGCTGC TGGTGAGGAC GTCGGCGACG TGCTCATCGA CGCGCTGCTC
GCTGCCGGCG TCACGACGCT CAAGGTGCGC TCCGTGCTCA CCTGCGAGTC GCAGGTCGGC
ACGTGCGCCA AGTGCTACGG CCGCTCGCTC GCGACCGGCA AGCTCGTCGA CATCGGCGAG
GCCGTCGGCA TCATCGCAGC CCAGTCGATC GGTGAGCCCG GTACGCAGCT GACCATGCGT
ACCTTCCACA CCGGTGGTGT GGCGTCGGCC GACGACATCA CGCAGGGTCT GCCGCGTGTC
ACCGAGCTGT TCGAGGCCCG TACCCCCAAG GGTGAGGCCC CGATCGCGGA GTACTCCGGC
AAGATCACGA TCGACGACTC CGAGCGCACC CGTCGGATCG TCCTCACCCC CGAGGACGGC
TCTGAGGAGA TCGCCTACCC GGTGACCAAG CGCTCGCGCC TGCTCGTCGA GGACGGCCAG
GACGTCGTCG TCGGCACCCA GCTCGTCCAG GGTGCTGTCG ACCCGAAGAA GGTCCTGCGC
ATCCTCGGAC CGCGTGCCAC CCAGAAGCAC CTGGTGGACG AGGTCCAGGA GGTCTACGGG
TCGCAGGGTG TGGACATCCA CGACAAGCAC ATCGAGGTCA TCGTGCGGCA GATGCTGCGT
CGCGTGACCG TGCTCGACTC GGGTGACTCC ATCCTCCTCC CGGGTGAGCT CGCCGAGCGT
GGTCGCTTCG AGAACGCGAA CCGTCAGGCT GTCGCCGAGG GCGGTCAGCC GGCCTCGGGT
CGTCCGGAGC TCATGGGCAT CACGAAGGCG TCGCTCGCGA CGGACTCGTG GCTGTCCGCG
GCCTCGTTCC AGGAGACCAC CCGCGTGCTC ACGGAGGCCG CCATGAGCGG TCGCCGCGAC
CCGCTGCTGG GCCTCAAGGA GAACGTCATC CTCGGAAAGC TCATCCCTGC CGGTACGGGC
CTGCCCCGCT ACCACGAGGT CACGGTCGAG CCCACCGAAG AGGCGAAGGC CGAGCTGTAC
CCGAGCTTCG GGTACGACGA GATCGACTTC CCGGCGCTCG GCATGGGCTC CGGCGAGGCC
ATCCCGCTCG AGGACATCGA CTTCGGCCCG GACTTCCGCT GA
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| Protein sequence | MLDVNVFDEL RIGLATADDI RTWSHGEVKK PETINYRTLK PEKDGLFCEK IFGPTRDWEC
YCGKYKRVRF KGIICERCGV EVTRSKVRRE RMGHIELAAP VTHIWFFKGV PSRLGYLLDL
APKDLEKVIY FAAYMVTSVD VDGRQEDLPN LQNEIDLEKK EITDRRDNDI ETRARRLESD
LAELEAEGAR ADARRKVRDS AEREMAQLRK RADAELERLE QVWDKFKNLK VADLEGDEML
YRALQDRYGN YFEGSMGAAA IQKRLQDFDL DAEATSLREI IRSGKGQKKT RALKRLKVVN
AFLTTTNSPT GMVLDAVPVI PPDLRPMVQL DGGRFATSDL NDLYRRVINR NNRLKRLLDL
GAPEIIVNNE KRMLQEAVDS LFDNGRRGRP VTGPGNRPLK SISDMLKGKQ GRFRQNLLGK
RVDYSGRSVI VVGPQLKLHQ CGLPKQMALE LFKPFVMKRL VDLNHAQNIK SAKRMVERAK
SAVWDVLEEV ITEHPVLLNR APTLHRLGIQ AFEPQLVEGK AIHLHPLVCA AFNADFDGDQ
MAVHLPLSAE AQAEARILML SSNNILKPSD GRPVTMPSQD MIIGLYHLTS DKVDPVGEGR
AFSSVSEAVM AFDQGSLDLN AVVTIRMEGL VPPVSGFEAP EGWVEGEPIL FTTTLGRALF
NELLPVTYPY VNSVVDKKRL SQIVNELAET YPKVEVAESL DALKAAGFRW ATRSGITISI
SDVATPKAEK AAILEAHESR ALKVQQQFDK GLITDDERRQ ELIEIWTQAT DKVAKAMQEN
FPARNTVYRM VGSGARGNWM QVRQIAGMRG LVANPKGEII PRPIKSNYRE GLSVLEYFIA
THGARKGLAD TALRTADSGY LTRRLVDVSQ DVIVREDDCG TERGLTLPVG EDLGDGRLVR
HGKVEQSIYS RTLAASVEVD GTVLGAAGED VGDVLIDALL AAGVTTLKVR SVLTCESQVG
TCAKCYGRSL ATGKLVDIGE AVGIIAAQSI GEPGTQLTMR TFHTGGVASA DDITQGLPRV
TELFEARTPK GEAPIAEYSG KITIDDSERT RRIVLTPEDG SEEIAYPVTK RSRLLVEDGQ
DVVVGTQLVQ GAVDPKKVLR ILGPRATQKH LVDEVQEVYG SQGVDIHDKH IEVIVRQMLR
RVTVLDSGDS ILLPGELAER GRFENANRQA VAEGGQPASG RPELMGITKA SLATDSWLSA
ASFQETTRVL TEAAMSGRRD PLLGLKENVI LGKLIPAGTG LPRYHEVTVE PTEEAKAELY
PSFGYDEIDF PALGMGSGEA IPLEDIDFGP DFR
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