Gene Sked_29680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_29680 
Symbol 
ID8634602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3297041 
End bp3297871 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content69% 
IMG OID 
ProductSSU ribosomal protein S3P 
Protein accessionYP_003315704 
Protein GI269796249 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.778759 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGACAGA AGGTTCACCC GCACGGGTAC CGTCTCGGCA TCACCACCGA CCACCGGTCG 
CGTTGGTTCG CCGACAGCAC CAAGCCCGGT CAGCGCTACC GCGACTACGT CCGTGAGGAC
GTCCAGATCC GCAAGCTCAT GAGCACCGGT CTCGAGCGCG CAGGAATCTC GAAGGTTGAG
ATCGAGCGCA CCCGCGACCG CGTCCGCGTC GACATCCACA CCGCCCGTCC GGGCATCGTG
ATCGGTCGTC GTGGCGCCGA GGCAGACCGC ATCCGCGGCG AGCTCGAGAA GCTCACGGGC
AAGCAGGTCC AGCTCAACAT CCTCGAGGTC AAGAACGCTG AGATCGATGC TCAGCTCGTG
GCCCAGGGGA TCGCCGAGCA GCTCGCGAGC CGCGTCTCGT TCCGCCGTGC GATGCGCAAG
GGCATGCAGT CCGCCCAGCG CGCCGGCGCC AAGGGCATCC GTGTCCAGTG CGCTGGTCGT
CTCGGTGGCG CCGAGATGAG CCGCAGCGAG TTCTACCGCG AAGGCCGTGT GCCGCTGCAC
ACGCTCCGCG CGAACATCGA CTACGGCTTC TTCGAGGCCC GCACCACCTT CGGCCGTATC
GGCGTGAAGG TGTGGATCTA CAAGGGCGAC ATGACGGAGA AGGAGTTCGC GGCTTCGCAG
GCGAACCAGG CGCCTCGTGC GCCCCGTGGT GGCCCGCGCG GCGAGCGTCC CGCTCGCGGT
GGTCGTCGTA ACGAGCGTCC GGCCGCTGCC GAGGCGCCCG CCCAGGCCGA CCAGGCTGCT
GCTGCTCCGG CAGAGGCTGC CCCGGCCGCT CCGACCGGAA CGGAGGCCTG A
 
Protein sequence
MGQKVHPHGY RLGITTDHRS RWFADSTKPG QRYRDYVRED VQIRKLMSTG LERAGISKVE 
IERTRDRVRV DIHTARPGIV IGRRGAEADR IRGELEKLTG KQVQLNILEV KNAEIDAQLV
AQGIAEQLAS RVSFRRAMRK GMQSAQRAGA KGIRVQCAGR LGGAEMSRSE FYREGRVPLH
TLRANIDYGF FEARTTFGRI GVKVWIYKGD MTEKEFAASQ ANQAPRAPRG GPRGERPARG
GRRNERPAAA EAPAQADQAA AAPAEAAPAA PTGTEA