Gene Sked_29590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_29590 
Symbol 
ID8634593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3293389 
End bp3293928 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content66% 
IMG OID 
ProductLSU ribosomal protein L6P 
Protein accessionYP_003315695 
Protein GI269796240 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.775265 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGTA TCGGCAAAGT CCCCGTCCCG GTTCCGTCCG GTGTGGACGT CAGCATCAGC 
GGAGCGCTGG TGACGGTCAA GGGTCCCAAG GGAACCCTCG AGCACGTCAT CCCCGCCCCC
ATCGAGGTCT CGCTCGCTGA GGACGGTGCC CTCGCGGTCA CCCGTCCCAA CGACGAGCGC
ACCTCACGCG CCCTGCACGG GCTCACCCGT ACGCTCCTCG CCAACATCAT CACCGGTGTG
ACCGAGGGCT ACGAGAAGAA GCTCGAGATC GTCGGCACCG GTTACCGCGT GACGGCCAAG
GGTTCCGAGC TCGAGTTCGC GCTCGGCTTC AGCCACCCGG TGGTCATCTC GGCCCCCGAG
GGCATCACCT TCGCCGTCGA GGCGCCGACC AAGTTCTCGG TCAGCGGCAT CGACAAGCAG
CAGGTGGGCG AGGTCGCCGC GAACATCCGC AAGATCCGCA AGCCGGAGCC CTACAAGGGC
AAGGGCGTGC GTTACGCGGG CGAGATCGTC CGTCGCAAGG CCGGAAAGGC TGGTAAGTAA
 
Protein sequence
MSRIGKVPVP VPSGVDVSIS GALVTVKGPK GTLEHVIPAP IEVSLAEDGA LAVTRPNDER 
TSRALHGLTR TLLANIITGV TEGYEKKLEI VGTGYRVTAK GSELEFALGF SHPVVISAPE
GITFAVEAPT KFSVSGIDKQ QVGEVAANIR KIRKPEPYKG KGVRYAGEIV RRKAGKAGK