Gene Sked_29520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_29520 
Symbol 
ID8634586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3288531 
End bp3289370 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content73% 
IMG OID 
Productmethionine aminopeptidase, type I 
Protein accessionYP_003315688 
Protein GI269796233 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.938726 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.559047 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCGGCC GCGAGAAGAT CGAGTACAAG ACGCCTGAGC AGGTCGCGTG CATGCGGCGC 
GCCGGTCTCG TGGTCGCGGC CGCCCTCGAC GCGGTGCGGA CCGCGGCCGT GTCCGGGAGC
ACGACCTCCG GGCTCGACGC CGTCGCCGCC GACGTGATCG CCGATGCCGG GGCCACGGCG
TCGTTCCTCG GCTACGAGGG CTTCCCCGCC ACGGTGTGCA TCTCGGTCAA CGACGCCGTG
ATCCACGGCA TCCCCGGGGA CCGTGCCCTG GTCGACGGTG ACCTCGTGTC GGTCGACTGC
GGCGCGATCG TCGACGGCTG GCACGCGGAC GCCGCCCTGT CCTTCGTGGT CGGTGGAGAC
GCTGCTGCGG ACCCGGCCGA CCTCGCACTC GTGCGGGCCA CCGAGGACGC GCTCTGGGCC
GGTGTCGCGG CCCTGGCGTC GGGCGACCGC CTGAGCGCGG TGGCGAACGC GGTCGACGAC
TCGATCACCG AGGCGGCCGA GCGTGACGGC GCACGGTACG GCATCGTCGA GGACTACGTC
GGCCACGGCA TCGGGACGTC GATGCACCAG GCGCCCGACG TCCTCAACTA CCGCACGCGG
GAGCGCGGCG CCAAGATCCG GCCGGGCATG TGCCTCGCGG TCGAGCCGAT GATCACCCGT
GGCGACCAGC TGACGCACGT CTGCGAGGAC GACTGGACGG TCGTCACCAG CGACGGGTCG
CGTGCCGCGC ACTCCGAGCA CACCGTCGCG GTGCTCGACG GCGGTGTGTG GGTCCTGACG
GCTCCGGACG GCGGCGCAGA GCGCCTGGCT GCCCTCGGCG TGCGGATCGC CCCGGTCTGA
 
Protein sequence
MFGREKIEYK TPEQVACMRR AGLVVAAALD AVRTAAVSGS TTSGLDAVAA DVIADAGATA 
SFLGYEGFPA TVCISVNDAV IHGIPGDRAL VDGDLVSVDC GAIVDGWHAD AALSFVVGGD
AAADPADLAL VRATEDALWA GVAALASGDR LSAVANAVDD SITEAAERDG ARYGIVEDYV
GHGIGTSMHQ APDVLNYRTR ERGAKIRPGM CLAVEPMITR GDQLTHVCED DWTVVTSDGS
RAAHSEHTVA VLDGGVWVLT APDGGAERLA ALGVRIAPV