Gene Sked_29430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_29430 
Symbol 
ID8634577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3278861 
End bp3279601 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content76% 
IMG OID 
Productpredicted hydrolase or acyltransferase of alpha/beta superfamily 
Protein accessionYP_003315679 
Protein GI269796224 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0217971 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGGCA CCAGCGACCT CCCGGTGGTG CTGGTGCACG GCATCCGGAC CTCCGCGACC 
ATGTGGCGTG CGCAGGTGCT CGCCCTCGAG GCCGCCGGGC GCACCGTCCG TGCCGTGGAC
CTGCCCGGGC ACGGGTCACG CCTCGGGACG CCGTTCACCG TCGACGGGTG CGAGCGGGTG
GTGGTCGACG CGATCGACGA GGTCGGCGGC GAGGCGCTGC TCGTCGGCCT CTCGCTCGGC
GGCTACCTGT CGATCGAGGT GGCGGCCCGC AACCCCGGCA AGGTCCGGGG ACTGGTCGCC
GCCGGCTGCT GCACCGACCC GCGGGTGCCC GCCCGGGCCG CCTGGACCCG GCTCGCCCGC
TGGATCGAGC GGACCCCGGG GTCCGGCTCA GGGCTCAACG CCTTCATGGT GCGGGCCGCG
CTCTCCCCGC AGGCGCAGGC GGACATCGCC GCGGGAGGGT TCGCGCTGCG GGTCATGTCG
GAGGCTCTCG ACGCGGTCGG GGTGCTCGAC CCGCTGACCG CCCTGGAGCG GTCTGCCTGC
CCGGTCTGGC TCGTCAACGG AGCCTGGGAC CACTTCCGCA CGCAGGAGCG TGCCTACCTC
CGTGCCGCGG GGCGCAGCGG CCAGCCGGTC CGGCACGTCG TGGTGCCCGG CGCGCGGCAC
CTGGTGAGCC TCGACGCCCC GGTCGCGTTC TCCCGGGTGG TCCTGGAGGC CCTCGACACG
GTCGACCCGC GGCGACGCTG A
 
Protein sequence
MSGTSDLPVV LVHGIRTSAT MWRAQVLALE AAGRTVRAVD LPGHGSRLGT PFTVDGCERV 
VVDAIDEVGG EALLVGLSLG GYLSIEVAAR NPGKVRGLVA AGCCTDPRVP ARAAWTRLAR
WIERTPGSGS GLNAFMVRAA LSPQAQADIA AGGFALRVMS EALDAVGVLD PLTALERSAC
PVWLVNGAWD HFRTQERAYL RAAGRSGQPV RHVVVPGARH LVSLDAPVAF SRVVLEALDT
VDPRRR