Gene Sked_28790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_28790 
Symbol 
ID8634513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3217374 
End bp3218603 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003315615 
Protein GI269796160 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAGC CGCATCTCGC ATGGTTGCCC GACCATCACC TCCCCGTGGC GTCGACGCTC 
GCACACGCCG AGGAGCTCAT CGACCACCTC AACGTCGCAG TGTTGCGGTA CGGCGACACT
GAGGGTGACG ACGGCCCGCT CCACCTCGTG GAGGTACCGG TCCACGGTGG GTCCGAGACG
CGGATCGCCG CCATCCGGCC GGTCCCGCGC GCGATCGCCC TCTACGCGGC TGACGCCATG
ACGACCCTGC GTGCCGCGAT CGAACACACG ATCTACGCCG AGGTCGAGTA TCAGCTCGGC
CGGGCCATGA GGGACAAGGA GCCGGGGAGC ATCTCGATGC CCGCCTCGAC GACGCCCGAG
GACTTCGCCA TCTGGGAGCA GAAGGGCTCC AAGCGGATGC CCGCGCCCTT GCTCTACGGG
TCGCCGCTGT ACCGCCGCAT CGAGGAGCTT CAGCCGTACA GGCTACGCAA CACCCCTCAG
ACCCATCCGC TGTACCTGCT TGTCTCGCAC ACGAATCTAT CCAAGCACAG GACGCCTGCG
GTTGCCGCCG CGCGTGTAGC CCGCATCATC CCTGACACTC CGACGGACGC GGTCGCCTTC
ATGCCGCTGA GCGAAGGCCC ATCGCGGGTG GGGGACGTCC TCGCACGAAC CGACGCGGGG
ACGCAGGTCC CCGTCTCGAT CTACGCCACC CTGGCTCTCC AGAGACCCGG TACCGATGAG
TGGCCCGTGC TGGTGCACGA GATCGGAGCG CTCGCCACGT GGGTTCGTAC GGTCGCCATC
CCCGTGCTCG TGACCGGCTC TACTCAGCCC GAGCTTCTGC CCTCCACCTA CAGCACATCA
GTCGGGTACG GCAGCAACGA CGATGAGCGC GAGGCGCTGA GAGCGGGTAC CTACCTCACG
GCGCGGGAGC GCGCCAACCT CGCGGTCGAG ACGCGCATGG CCAGGACGTC GCTGGTCGGC
ATGATCTCCG AGCCCGCGAC CAGCCCTCCC CTTTCGGTCC TGACTGCATG GGCAGAGTCG
CTCACCGATC AGCAGGCCCT CGATCGCGCG CGAGCCATCC GGCAGTTCAT CCTGACGCAC
GGGTACGACG ACGGGATCGT CGACCTGGTC GGAGCCTTCC ACGCCGAGGC GCTGGAGCAT
GCGCGGAAGT CCGGCAGTGA TGCCCAGGCG GATGTTGTGG TGGATCAGCC GGCTGAGGTG
GACCAGGTGG ATGAAGAGGT AGGTAAGTAG
 
Protein sequence
MPKPHLAWLP DHHLPVASTL AHAEELIDHL NVAVLRYGDT EGDDGPLHLV EVPVHGGSET 
RIAAIRPVPR AIALYAADAM TTLRAAIEHT IYAEVEYQLG RAMRDKEPGS ISMPASTTPE
DFAIWEQKGS KRMPAPLLYG SPLYRRIEEL QPYRLRNTPQ THPLYLLVSH TNLSKHRTPA
VAAARVARII PDTPTDAVAF MPLSEGPSRV GDVLARTDAG TQVPVSIYAT LALQRPGTDE
WPVLVHEIGA LATWVRTVAI PVLVTGSTQP ELLPSTYSTS VGYGSNDDER EALRAGTYLT
ARERANLAVE TRMARTSLVG MISEPATSPP LSVLTAWAES LTDQQALDRA RAIRQFILTH
GYDDGIVDLV GAFHAEALEH ARKSGSDAQA DVVVDQPAEV DQVDEEVGK