| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_28460 |
|---|
| Symbol | |
|---|
| ID | 8634480 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 3177982 |
|---|
| End bp | 3178719 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | ABC-2 type transporter |
|---|
| Protein accession | YP_003315582 |
|---|
| Protein GI | 269796127 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.373248 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCG CCCTCCAGCA GTACGGTCTG CTCACCCAGT GGCAGCTCCG ACGGCAGTCT
GTGCTCCTCC CGCTCCTCGT CGTCGTCCAG GGCGCCCTCG CCGTCGGGAC CGTGCTGGGC
TTCGGCATCC TCATGGGTGA CATCGAGGGG CAGGCTGCGC TCTACCTGGC CACCGGGGCA
CCGACCATCA CGCTCATCGT CATCGGTCTT GTCATGGCGC CGCAGATGCT CGCCCAGGCG
AAGACCGAGG GGAGCGCGCA GTGGATGATG ACGCTCCCGG TCCCTCGTCT CGTGTTCCTC
GCGGCGGACC TCACCGTGTG GACTCTCGTG GCGCTCCCGG GCACCGTGCT CGCGGTCTTC
GTCGGGGTGC TGCGCTACGA CGTCTCTCTC GACGTCTCCT GGTGGGTGCT CCCTGCCGCG
CTCCTCGTCT CGCTCGCGGC CGCAGCCATC GGCTACACGG TGGCCGCGCT GCTTCCCCCG
TCGCTCGCGA TGCTGTTCAC CCAGCTCGTC GTCTTCGTGA TCCTGCTCTT CTCGCCCGTC
TCCGTCCCGG CCGACCAGTT CCCGTCGTGG CTCGCCTCGC TGCACGAGGT GCTGCCGATC
GCGCCGATGG CCGAGCTCGT CCGTGCCGGG CTGGCCGGGT CGACCTTCGC CGTCGAGACC
GGACCGCTGC TCGTCCTGAT CGCCTGGTGC GCAGGCTGCG TCGCGCTCGC CGGAGCCGCG
CTGCGGCGCC GGGGGTAG
|
|---|
| Protein sequence | MTTALQQYGL LTQWQLRRQS VLLPLLVVVQ GALAVGTVLG FGILMGDIEG QAALYLATGA
PTITLIVIGL VMAPQMLAQA KTEGSAQWMM TLPVPRLVFL AADLTVWTLV ALPGTVLAVF
VGVLRYDVSL DVSWWVLPAA LLVSLAAAAI GYTVAALLPP SLAMLFTQLV VFVILLFSPV
SVPADQFPSW LASLHEVLPI APMAELVRAG LAGSTFAVET GPLLVLIAWC AGCVALAGAA
LRRRG
|
|---|
| |