Gene Sked_28450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_28450 
Symbol 
ID8634479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3177008 
End bp3177847 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content74% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003315581 
Protein GI269796126 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.555548 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTCCG TCGCACGGCA GCCGCGGATG ATCGGTCTGC TCCTCCTGTT CCTGCTCGCC 
GCCGCCGTGT GCGCGCGCCT CGGCGTGTGG CAGCTGGACC GTGCGCACGA GCGCGGGGAC
CTCGCGGACA GGCAGGCGGC CGCCGAGGCG CAGAGCCAGG GCCCCGAGGG CCTGGGCGCG
CTCCTCGAGC CGCAGTCGAC CTTCCCCGGT GACCTCGTCG GTCGACAGGC GTGGGTCGAG
GGCGAGTACG TGCCGGGCAC GCAGATGCTC GTCGAGGGCC GCGCCCACGA CGGCGCGCAG
GGCTTCCTCG TGCTCACGGC GCTGCGGGTG TCCGACGACG GCACCGGTGG CGCGTCTTGG
GCGGACCTCT CGGGTCCCCC CGTCCTGCCC GTGGTGCGCG GCTGGGTGCC GGCCACGGCC
GACGGCGCAG AGCCGGAGGT CGCTGCCACC GTCCTCGCCG AGCCGACGGG CCCGGTCCGG
CTCTCCGGCT ACCTCCAGGC CTCCGAGGCC CTGGGCCAGG GCTCGGACGT CCCGGGTCGC
ACCGACTCGA TCAGCTCGGC GTCTCTCGCG AACGTGTGGG GCGGCCCGAT CTACTCGGGC
TACGTGGTCG TCTCGACCTC CGACCCGGCC CAGCCCGCGG GCATCGAGCT GCTCGACCGT
CCGAGCATCG AGGGCGGGGA CGGCCTCAAC CTGCAGAACC TGTTCTACGC GCTCCAGTGG
TGGATCTTCG GCGGGTTCGC CGTCCTGCTG TGGCTGCGCC TGGTGCGCGA CGAGACGCGC
GGGGGAGAGA AGAGCGCGGA CGAGGACCCC TTCGGAGCCC TCGCCCGCGC CGAGGCCTGA
 
Protein sequence
MLSVARQPRM IGLLLLFLLA AAVCARLGVW QLDRAHERGD LADRQAAAEA QSQGPEGLGA 
LLEPQSTFPG DLVGRQAWVE GEYVPGTQML VEGRAHDGAQ GFLVLTALRV SDDGTGGASW
ADLSGPPVLP VVRGWVPATA DGAEPEVAAT VLAEPTGPVR LSGYLQASEA LGQGSDVPGR
TDSISSASLA NVWGGPIYSG YVVVSTSDPA QPAGIELLDR PSIEGGDGLN LQNLFYALQW
WIFGGFAVLL WLRLVRDETR GGEKSADEDP FGALARAEA