Gene Sked_28070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_28070 
Symbol 
ID8634441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3135104 
End bp3136093 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content72% 
IMG OID 
Productmalate dehydrogenase (NAD) 
Protein accessionYP_003315543 
Protein GI269796088 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0979887 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCCA CCCCTGTGAA CGTCACCGTG ACAGGAGCCG CCGGACAGAT CGGCTACGCC 
CTCCTGTTCC GCATCGCCTC TGGCCAGCTC CTCGGGCCCG ACGTGCCCGT GCGGCTGCGC
CTGCTCGAGA TCCCGCAGGG GGTCAAGGCC GCCGAGGGCA CCGCGATGGA GCTCGAGGAC
TGCGCCTTCC CGCTGCTCGC CGGGATCGAC ATCTTCGACA ACCCGACCGA CGGCTTCGCC
GGCACCAACA TCGGGCTGCT CGTCGGCGCG CGCCCGCGGA CCAAGGGCAT GGAGCGCGGT
GACCTGCTCG AGGCCAACGG CGGGATCTTC GGCCCGCAGG GCGCGGCCAT CAACGCCGGT
GCAGCCGACG ACGTGCGCAT CCTGGTGGTC GGCAACCCGG CGAACACCAA CGCCCTCATC
GCCGCCTCGC ACGCCCCGGA CGTCCCGTCC GACCGGTTCA CCGCCATGAC GCGGCTCGAC
CACAACCGTG CGCTCAGCCA GGCGGCGACC AAGGCCGGTG TGCCGGTCTC GCAGGTCCGC
CGCCTGACCA TCTGGGGCAA CCACTCGGCC ACCCAGTACC CCGACCTCTT CCACGCCGAG
ATCGACGGGG CGCCCGCGAC GGCTCTCACC GACGACTCGA CCTGGTTGAC GGACGACTTC
ATCCCCACCG TCGCGACGCG GGGCGCTGCC ATCATCGAGG CGCGCGGGGC CTCGTCGGCG
GCGTCGGCGG CCAACGCGGC CGTCGACCAC GTGCGCGACT GGGTCCACGG CACCCCGAAG
GGCGACTGGA CGTCCGCGGG CATCGTGTCC GACGGCTCCT ACGGCGTCCC CGAGGGGCTC
GTGTCGTCCT TCCCGGTGGT CTCTCGCGAC GGCCGCTGGG AGATCGTCCA GGGTCTCGAG
GTCGGTGACT TCTCGCGCGA GCGCATCGAC GCCTCGGTCA AGGAGCTCGT CGAGGAGCGC
GACGCGGTGC GCAGCCTCGG GCTGATCTAG
 
Protein sequence
MSPTPVNVTV TGAAGQIGYA LLFRIASGQL LGPDVPVRLR LLEIPQGVKA AEGTAMELED 
CAFPLLAGID IFDNPTDGFA GTNIGLLVGA RPRTKGMERG DLLEANGGIF GPQGAAINAG
AADDVRILVV GNPANTNALI AASHAPDVPS DRFTAMTRLD HNRALSQAAT KAGVPVSQVR
RLTIWGNHSA TQYPDLFHAE IDGAPATALT DDSTWLTDDF IPTVATRGAA IIEARGASSA
ASAANAAVDH VRDWVHGTPK GDWTSAGIVS DGSYGVPEGL VSSFPVVSRD GRWEIVQGLE
VGDFSRERID ASVKELVEER DAVRSLGLI