Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_28010 |
Symbol | |
ID | 8634435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 3123996 |
End bp | 3124655 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003315537 |
Protein GI | 269796082 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0384037 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCACCA CCCCTGACAC CCCGGCCCCG ATCGCCGAGC CCGAGCGCGT GACCCGGCTC CTGCGCGACC AGATCGTCGA CGGGGACCGC CCACCGGGCA GCCGCCTCGT CGAGCGTGAG CTCGCGGCCG CGCTCGGTGT GAGTCGCGTC CCCGTGCGCG AGGCCCTCCA GACCCTCGCC GCCGAGGGGC TGGTCACCCA GCGACCGCGC AGCTGGGCCG TCGTGCGGAC CTTCACCGAC GACGACCTGC TCGACCTCGT CGAGGTCCGC TCCGCCATCG AGGTGCTCAC CGTGCGGCTG GCCGCCGAGC GGCGTACGCC CGAGCAGCTC CGCGACCTCT CCGCGGCGCT CGCGCGGGAG ACCTCTGCCG CGTCGTCCGG TGACGCGACC GAGGCGCGCC GTGCCGCGGC AGACTTCCAC GAGGTGGTCT CGACGATGGC GGGCAACACC GTCCTCGACG AGATCTCGGC GCTCACCGCC AGCCGGATGC GCTGGATGCT CGGCCAGCAC GACGACCTCG GGGCCATGGC GGCCGAGCAC GCGGCGCTGC TCGACGCGGT CCGCGACGGC GACGTGGAGC GCGCCGACTG CCTGGCCCAG GAGCACCTGC GGACGAGCCT GGCCTCCGCC CGCGCGCGGC GGGCGCAGGC CGCGGGCTGA
|
Protein sequence | MSTTPDTPAP IAEPERVTRL LRDQIVDGDR PPGSRLVERE LAAALGVSRV PVREALQTLA AEGLVTQRPR SWAVVRTFTD DDLLDLVEVR SAIEVLTVRL AAERRTPEQL RDLSAALARE TSAASSGDAT EARRAAADFH EVVSTMAGNT VLDEISALTA SRMRWMLGQH DDLGAMAAEH AALLDAVRDG DVERADCLAQ EHLRTSLASA RARRAQAAG
|
| |