Gene Sked_28010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_28010 
Symbol 
ID8634435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3123996 
End bp3124655 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content76% 
IMG OID 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003315537 
Protein GI269796082 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0384037 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACCA CCCCTGACAC CCCGGCCCCG ATCGCCGAGC CCGAGCGCGT GACCCGGCTC 
CTGCGCGACC AGATCGTCGA CGGGGACCGC CCACCGGGCA GCCGCCTCGT CGAGCGTGAG
CTCGCGGCCG CGCTCGGTGT GAGTCGCGTC CCCGTGCGCG AGGCCCTCCA GACCCTCGCC
GCCGAGGGGC TGGTCACCCA GCGACCGCGC AGCTGGGCCG TCGTGCGGAC CTTCACCGAC
GACGACCTGC TCGACCTCGT CGAGGTCCGC TCCGCCATCG AGGTGCTCAC CGTGCGGCTG
GCCGCCGAGC GGCGTACGCC CGAGCAGCTC CGCGACCTCT CCGCGGCGCT CGCGCGGGAG
ACCTCTGCCG CGTCGTCCGG TGACGCGACC GAGGCGCGCC GTGCCGCGGC AGACTTCCAC
GAGGTGGTCT CGACGATGGC GGGCAACACC GTCCTCGACG AGATCTCGGC GCTCACCGCC
AGCCGGATGC GCTGGATGCT CGGCCAGCAC GACGACCTCG GGGCCATGGC GGCCGAGCAC
GCGGCGCTGC TCGACGCGGT CCGCGACGGC GACGTGGAGC GCGCCGACTG CCTGGCCCAG
GAGCACCTGC GGACGAGCCT GGCCTCCGCC CGCGCGCGGC GGGCGCAGGC CGCGGGCTGA
 
Protein sequence
MSTTPDTPAP IAEPERVTRL LRDQIVDGDR PPGSRLVERE LAAALGVSRV PVREALQTLA 
AEGLVTQRPR SWAVVRTFTD DDLLDLVEVR SAIEVLTVRL AAERRTPEQL RDLSAALARE
TSAASSGDAT EARRAAADFH EVVSTMAGNT VLDEISALTA SRMRWMLGQH DDLGAMAAEH
AALLDAVRDG DVERADCLAQ EHLRTSLASA RARRAQAAG