Gene Sked_27990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_27990 
Symbol 
ID8634433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3122522 
End bp3123280 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content70% 
IMG OID 
Productmonosaccharide ABC transporter ATP-binding protein 
Protein accessionYP_003315535 
Protein GI269796080 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.145252 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACAG CCCGCCCGAT CCCCGCGCTG AGCCTCCGTG GGATCGACAA GTCCTTCGGC 
GCCGTCAAGG CGCTCTCCAG CATCGACCTC GACATCTACC CGGGCGAGGT CGTGGCCCTG
GTCGGCGACA ACGCGGCCGG CAAGTCGACC ATCGCCAAGG TGATCGCCGG TGTGATCACC
CCTGACGCGG GCATCATCGA GTCTGACGGG GTGCCGGTCA CGATCCCGTC GCCGACGAGC
GCCCACGCGC TGGGGATCAC GACGGTGTTC CAGGAGCTGG CCCTGGTCGA GAACCTCGAC
ATCGTCTCGA ACCTCTACCT CGGCCGCGAG CTGCGGCGGG GAAGCATGCT GCTCGAGTCC
GAGATGGAAG AGGTCGCACG GCAGGTGTTG CGCGACCTCA CCATCCGGGT GCCGTCGGTC
CGCACCCTGG TCGCCGACCT GTCCGGCGGC CAGCGACAGG CCGTGGCGAT CGCCCGGACA
CTGCTGGGGC ACCCGCGCAT CGTCGTCCTC GACGAGCCGA CGGCGTCGCT CTCCGTCTCG
TCGACGGCCG AGGTGCTCAC GCTCATCGAG CGCCTCCGCG ACCTCGGGCA CGGCGTGGTG
CTCATCAGCC ACAACATGGG AGACGTCCGG GCCGTCGCCG ACCGTATCGA GGTGCTGCGG
CACGGCCGCA ACAACGGCAG CTTCGCCGCG CGCACCGTGA GCTACGAGGA CATCATCGCG
GCGATCACCG GCGCCGTGGA CTTCTCGAAC CGCCGCTGA
 
Protein sequence
MTTARPIPAL SLRGIDKSFG AVKALSSIDL DIYPGEVVAL VGDNAAGKST IAKVIAGVIT 
PDAGIIESDG VPVTIPSPTS AHALGITTVF QELALVENLD IVSNLYLGRE LRRGSMLLES
EMEEVARQVL RDLTIRVPSV RTLVADLSGG QRQAVAIART LLGHPRIVVL DEPTASLSVS
STAEVLTLIE RLRDLGHGVV LISHNMGDVR AVADRIEVLR HGRNNGSFAA RTVSYEDIIA
AITGAVDFSN RR