Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_27990 |
Symbol | |
ID | 8634433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 3122522 |
End bp | 3123280 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | monosaccharide ABC transporter ATP-binding protein |
Protein accession | YP_003315535 |
Protein GI | 269796080 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.145252 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGACAG CCCGCCCGAT CCCCGCGCTG AGCCTCCGTG GGATCGACAA GTCCTTCGGC GCCGTCAAGG CGCTCTCCAG CATCGACCTC GACATCTACC CGGGCGAGGT CGTGGCCCTG GTCGGCGACA ACGCGGCCGG CAAGTCGACC ATCGCCAAGG TGATCGCCGG TGTGATCACC CCTGACGCGG GCATCATCGA GTCTGACGGG GTGCCGGTCA CGATCCCGTC GCCGACGAGC GCCCACGCGC TGGGGATCAC GACGGTGTTC CAGGAGCTGG CCCTGGTCGA GAACCTCGAC ATCGTCTCGA ACCTCTACCT CGGCCGCGAG CTGCGGCGGG GAAGCATGCT GCTCGAGTCC GAGATGGAAG AGGTCGCACG GCAGGTGTTG CGCGACCTCA CCATCCGGGT GCCGTCGGTC CGCACCCTGG TCGCCGACCT GTCCGGCGGC CAGCGACAGG CCGTGGCGAT CGCCCGGACA CTGCTGGGGC ACCCGCGCAT CGTCGTCCTC GACGAGCCGA CGGCGTCGCT CTCCGTCTCG TCGACGGCCG AGGTGCTCAC GCTCATCGAG CGCCTCCGCG ACCTCGGGCA CGGCGTGGTG CTCATCAGCC ACAACATGGG AGACGTCCGG GCCGTCGCCG ACCGTATCGA GGTGCTGCGG CACGGCCGCA ACAACGGCAG CTTCGCCGCG CGCACCGTGA GCTACGAGGA CATCATCGCG GCGATCACCG GCGCCGTGGA CTTCTCGAAC CGCCGCTGA
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Protein sequence | MTTARPIPAL SLRGIDKSFG AVKALSSIDL DIYPGEVVAL VGDNAAGKST IAKVIAGVIT PDAGIIESDG VPVTIPSPTS AHALGITTVF QELALVENLD IVSNLYLGRE LRRGSMLLES EMEEVARQVL RDLTIRVPSV RTLVADLSGG QRQAVAIART LLGHPRIVVL DEPTASLSVS STAEVLTLIE RLRDLGHGVV LISHNMGDVR AVADRIEVLR HGRNNGSFAA RTVSYEDIIA AITGAVDFSN RR
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