Gene Sked_27910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_27910 
Symbol 
ID8634425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3112569 
End bp3113153 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content73% 
IMG OID 
Producttranscriptional regulator, tetR family 
Protein accessionYP_003315527 
Protein GI269796072 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.839534 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.794272 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAGA AGCTGCGGTC TGACGCACGC GACAACCGCG ACCGCATCGT CACGGCGGCA 
CGCGCGCTCT TCGCCGAGTC GGGTCTCGAC GTGGGGATGC GCGAGATCGC CCGCAAGGCC
GAGGTGGGTC CCGCGACGCT CTACCGTCGC TTCCCCAGCA GGCAGGACCT CGTCGCCGAG
GCCTTCACCG TCGAGATCCG CTCGTGCCGG GAGACCGTCG AGGACGGGTG CGCAGACCCC
GACGCGTGGC GCGGGCTGAC CTCGGTCGTG ACGAGCCTGG TGACGGCCAA CGTCCACAAC
CGGGGGTTCA CGGACTCCTT CTTCGCCGCC GACCCGCCGG ACCAGACGAT CTCGGAGGAG
CGGCGGGACC TCCTCCGACA GCTGTCGGGC CTCGCTCGAC GAGCCCAGGC GCAGGGTCGC
CTGCGCCCGG ACTTCGTCGT CGACGACCTC GTCCTCGTCC TGCTCGCCGT CCGCGGCCTG
AGCACCCTCG CCCCCGACGC ACGCGCCGCG GCCGCCCGCC GCTTCGCGGT CCTCGCCGTA
GACGGCCTCC GCGCCCCGGC CCCTGCTCCG GCCACTCACT CCTGA
 
Protein sequence
MTQKLRSDAR DNRDRIVTAA RALFAESGLD VGMREIARKA EVGPATLYRR FPSRQDLVAE 
AFTVEIRSCR ETVEDGCADP DAWRGLTSVV TSLVTANVHN RGFTDSFFAA DPPDQTISEE
RRDLLRQLSG LARRAQAQGR LRPDFVVDDL VLVLLAVRGL STLAPDARAA AARRFAVLAV
DGLRAPAPAP ATHS