Gene Sked_27900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_27900 
Symbol 
ID8634424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3111633 
End bp3112433 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content70% 
IMG OID 
Productexodeoxyribonuclease III Xth 
Protein accessionYP_003315526 
Protein GI269796071 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.408548 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.79978 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCACCA TCGCTACAGC CAACGTCAAC GGCGTCCGTG CCGCGTACCG CAACGGGATG 
GGGGAGTGGC TCGCCGAGCG CAAGCCCGAG ATCCTCCTGC TCCAGGAGGT CCGTGCGACC
GACGAGATCC TCGAGGGGCT GCTCGGGGAG GGCTGGAACA GCGTCCACCA GGCCTGCGAC
ATCAAGGGGC GCGCGGGCGT CGCGATCGCC ACCACGCTGC CCTTCGCCGC GGTCCGGGTG
GGCCTCGGCA ACGGCGAGCC CGAGGTCCCC GTCGACACCG GACGCTGGGT CGAGGCCGAC
ATCGAGCTGC CCTCCGGCGA GGTGCTCACC GTCGTGTCCG TCTACATCCA CTCGGGCACC
GCGGGCACGC CCAAGATGGA CCAGAAGTTC GCCCACCTCG AGAAGGTGGA CGCACGCCTC
CGCGAGCTCA TGGACAGCGG CCGCCACGTG GTGGTCGGCG GCGACGTCAA CATCGCCCAC
CAGAACGTCG ACATCAAGAA CTGGAAGGGC AACCTCAAGT CCGCCGGGTT CCTCCCCGAG
GAGCGCGCCT ACCTCGACCG CTGGTTCGAG GCCGGCTGGG TAGACCTCGG TCGACGCCAC
GGCGGAGAGG GCCCCGGGCC GTACACCTGG TGGTCCAACC GCGGCCAGTC CTTCGCGAAC
GACGCCGGGT GGCGCATCGA CTACCAGCTG AGCACCCCGG CCCTCGCCGA GCTCGCCTCG
AACGTCCACG TCGACCGCGC CGACTCCTAC GAGGCCCGCT GGAGCGACCA CGCGCCGCTG
CTCGCCGACT ACGCGCTCTG A
 
Protein sequence
MVTIATANVN GVRAAYRNGM GEWLAERKPE ILLLQEVRAT DEILEGLLGE GWNSVHQACD 
IKGRAGVAIA TTLPFAAVRV GLGNGEPEVP VDTGRWVEAD IELPSGEVLT VVSVYIHSGT
AGTPKMDQKF AHLEKVDARL RELMDSGRHV VVGGDVNIAH QNVDIKNWKG NLKSAGFLPE
ERAYLDRWFE AGWVDLGRRH GGEGPGPYTW WSNRGQSFAN DAGWRIDYQL STPALAELAS
NVHVDRADSY EARWSDHAPL LADYAL