| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_27890 |
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| Symbol | |
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| ID | 8634423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | + |
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| Start bp | 3110018 |
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| End bp | 3111505 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | |
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| Product | ABC-type antimicrobial peptide transport system, permease component |
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| Protein accession | YP_003315525 |
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| Protein GI | 269796070 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.140819 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.653977 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGGGGCT GGCGCACGGG CGCAGACACG GAGACCGCGG AGGTCCCGGT GACGGACGCG
CACGACGTGG GCGCCGAGCC TGAGACCTCC GGCATGCACG AGACCATGGA ACAGGCGGGT
ACCGACGACG GTGCCGAGGC GGGTCGCCTC GGCTGGCTGC GTCGTGCCCC GCGCCGCGTC
GCCTCCGCGC TGCGCCTCGA CCGGCTGCCC TTCGTAGCAT CGCGCGAGGG CCGGCTGAGC
CGCTCTGACA TCCACCTCGG TGCCCGCCGG GACCGCTTCT CCCTGCGTGA CCTGTTCGCC
GAGTCCGCCC ACGGCATCGG TGCGAAGCCG GGTCGGCTGG TGCTGACCAT CCTCGGCACG
GTGCTGGGCA TCGGGTCGGT CGTGGTGACC GTCGGGCTCG CCCAGACGGC AGCGGGCCAG
ATCAGCGCAC AGTTCGACGC CGTCTCTGCC ACGCAGGCCC TCGTGACCCC TGGGTCGACG
GGCTCGTCGT GGAGCGGCAA CGCGCGCCCC AAGACGAGCC TGCCCTGGGA CTCCCCCGAG
CGAGTCCTGC GCCTCAACGG GGTGGAGGGC GCGGGCCTCG TCGGGGCGGT CGACGTCGGC
GACGCGGCGG TGACTGCCGT GCCGGTCAAC GACCCCTCGG CACCGCAGGT GGTGTCACCG
TCGGTCGTCG CCGCGTCGGG CGGGCTGCTC GAGGCCGTCC GCGGCCAGGT CGTCACCGGA
CGGTTCTTCG ACGACGGGCA CTCCGAGCGC GCCGACCGCG TGGTGGTCCT GGGGCAGCGG
GCTGCCGACC AGCTCGGTGT CAGCCGGGTC GAGAGCCAGC CGTCGATCTT CATCGGGGAC
GACAGCTACA CGGTCGTCGG CATCGTCGAC GGCATGCAGC GTCGCCCTGA CCTGCTCGAC
GCGGTGGTCC TGCCGCTCGG GACGGCACGG GCGGACTTCG GCCTCACCTC GGCCGAGGAG
CTGCACCTGC GCATCGCGAC GGGCGCAGGA CCGCTCGTGT CGGAGCAGGC GCCGGTCGCC
CTCGACCCGA ACACCCCGGA GAACTTCGAC GTGAAGGCAC CGGCGCAGGC CTCCGAGCTG
CGCCAGGCCG TCCAGGCGGA CATCAACGCG ATCTTCCTCG CCCTCGGCGG TGTCGCGCTG
CTCGTCGGCG GGCTCGGGAT CGCGAACGTC ACGCTGCTGT CGGTCATGGA GCGCCGGGGC
GAGATCGGCC TGCGCCGCGC CCTGGGTGCG TCGCGCAAGG ACATCGCCGG GCAGTTCGTC
GTCGAGTCGG TGGTCATCGG CCTGCTCGGC GGGCTCATCG GTGCGGCCAT CGGCGTGTTC
GTCGTGGTCG GTGTCTCTGT CCTCAAGGAC TGGACGGCGA TCCTCGACGT GCGGATGGCG
CTCGGCGCCG CGGCGATGGG CGGCGTCATC GGCCTCGTGG CGGGCATGTA CCCCGCGATG
AAGGCCTCCG CCATCGAGCC GATCACCGCG CTGCGCGGAG GGATCTGA
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| Protein sequence | MRGWRTGADT ETAEVPVTDA HDVGAEPETS GMHETMEQAG TDDGAEAGRL GWLRRAPRRV
ASALRLDRLP FVASREGRLS RSDIHLGARR DRFSLRDLFA ESAHGIGAKP GRLVLTILGT
VLGIGSVVVT VGLAQTAAGQ ISAQFDAVSA TQALVTPGST GSSWSGNARP KTSLPWDSPE
RVLRLNGVEG AGLVGAVDVG DAAVTAVPVN DPSAPQVVSP SVVAASGGLL EAVRGQVVTG
RFFDDGHSER ADRVVVLGQR AADQLGVSRV ESQPSIFIGD DSYTVVGIVD GMQRRPDLLD
AVVLPLGTAR ADFGLTSAEE LHLRIATGAG PLVSEQAPVA LDPNTPENFD VKAPAQASEL
RQAVQADINA IFLALGGVAL LVGGLGIANV TLLSVMERRG EIGLRRALGA SRKDIAGQFV
VESVVIGLLG GLIGAAIGVF VVVGVSVLKD WTAILDVRMA LGAAAMGGVI GLVAGMYPAM
KASAIEPITA LRGGI
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