Gene Sked_27830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_27830 
Symbol 
ID8634417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3103283 
End bp3104566 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content72% 
IMG OID 
ProductMg/Co/Ni transporter MgtE with CBS domain 
Protein accessionYP_003315519 
Protein GI269796064 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.885994 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAGCG CCGGAACCCA GGTCTTTGTC GCGCGCCTCG CCGGAACCAC GGTCTTCGAC 
CCGCTCGGGG ACCAGGTCGG GCGGGTGCGC GACGTCGTCG TGCTCGTCCG CTCGAAGGGT
GCGCCCCGGG CGGTCGGGCT CGTGGTCGAG GTCCCCGGGC GACGGCGGGT CTTCCTCCCG
CTGACCCGCG TGACGAGCAT CGACGCGGGC CAGGTCATCT CGACCGGCCT GCTCAACATG
CGACGCTTCG AGCAGCGCGC CATGGAGACC CTCGCCGTGG GCGAGCTCTT CGACCGCACC
GTCGAGATGG TCGACGGGTC CGGCCCGGTG ACCATCGAGG ACGTCTCGAT CGAGAAGCAG
CGCACCGGCG ACTGGCGCGT CAACAAGCTC TTCGTGCGAC GCGCGGGCGG CGGCAAGGGC
ACGCTCGGGC TGCGTCGACG CGGGCACACC CAGGTGGTCG ACGTCGACGC CGTCACCGGG
CTCGCCGACG TCTCCGCGTC CCAGGGCGCC GCGCTGCTGC TCGAGGCCTA CGACGGCCTC
AAGCCGGCGG CGCTCGCCGA CGTGCTGCAC GACCTCGGGA TGAACCGACG CAACGAGGTG
GCCGGGGCGC TCGACAACGA CCGCCTGGCC GACGTCCTCG AAGAGCTCCC GGGCGACGAC
CAGGTGTCGA TCCTCACCTC GCTCGACACC GGTCGCGCCG CGGACGTCCT CGAGGCCATG
CAGCCCGACG ACGCCGCCGA CCTGCTGCAC GAGCTCCCCG ACGCCCAGGC CGCCGAGCTG
CTGGGCCTCA TGGAGCCCGA CGAGGCCAAG GACGTGCGCC GTCTGCTCGC CTACGACGAG
AACACCGCGG GCGGCATGAT GACGACCGAG CCCGTCATCC TCTCCCCCGA GACACCGATC
GCCGCGGCGA TGGCGCACGT CCGCCGCGCC GACCTGTCCC CCGCGCTCGC GTCGATGGTG
TTCGTGGTCC GCCCGCCGCT CGAGACGCCG ACCGGCCGGT TCCTCGGGGT CGTGCACTTC
CAGAAGATGC TGCGCGAGCC TCCCCACGAA CCGCTCGGTT CCGTCCTCGA CACGGACGTC
GAGCACGTCA CGACCGACGC ACCGCTCGGC CGGGTGGCCC GCATCCTCGC CGCCTACAAC
CTGCTCGCGC TGCCCGTCCT CGACAGCGAG CGGCGCCTGC TCGGCGTGGT GAGCGTCGAC
GACGCTCTCG ACCACATGCT CCCCGCCGAC TGGCGCGAGA GCGACGACAC CGACAGCACC
AGGAACGAGG TGGCCCGTGG CTGA
 
Protein sequence
MSSAGTQVFV ARLAGTTVFD PLGDQVGRVR DVVVLVRSKG APRAVGLVVE VPGRRRVFLP 
LTRVTSIDAG QVISTGLLNM RRFEQRAMET LAVGELFDRT VEMVDGSGPV TIEDVSIEKQ
RTGDWRVNKL FVRRAGGGKG TLGLRRRGHT QVVDVDAVTG LADVSASQGA ALLLEAYDGL
KPAALADVLH DLGMNRRNEV AGALDNDRLA DVLEELPGDD QVSILTSLDT GRAADVLEAM
QPDDAADLLH ELPDAQAAEL LGLMEPDEAK DVRRLLAYDE NTAGGMMTTE PVILSPETPI
AAAMAHVRRA DLSPALASMV FVVRPPLETP TGRFLGVVHF QKMLREPPHE PLGSVLDTDV
EHVTTDAPLG RVARILAAYN LLALPVLDSE RRLLGVVSVD DALDHMLPAD WRESDDTDST
RNEVARG