Gene Sked_27750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_27750 
Symbol 
ID8634409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3094334 
End bp3096115 
Gene Length1782 bp 
Protein Length593 aa 
Translation table11 
GC content73% 
IMG OID 
ProductDNA/RNA helicase, superfamily II 
Protein accessionYP_003315511 
Protein GI269796056 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.417961 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.390673 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCAGCT CTACTTCCAG CAGCGTGCAG GCTGCAGACG TGACATTCGG CGACTTCGGG 
GTGCGCCCCG AGATCGTCCA GGCCCTCGCC GACGCCGGCA TCGTGGCTCC CTTCCCCATC
CAGGCGATGA CGCTCCCGGT GGCGATGGCA GGGCACGACA TCATCGGCCA GGCCAAGACC
GGTACCGGCA AGACCCTCGG GTTCGGCGTC CCGCTGCTCC ACCGCGTCGT CGCCCCGGGT
GAGCCCGGGT ACGACGAGCT CCCCGCGCCG GGCAAGCCCC AGGCGCTCGT CATCGTCCCG
ACCCGCGAGC TCGCCGTGCA GGTCGCCAAG GACCTCGAGG CCGCCTCGAC CAAGCGGTCG
GTGCGCATCG TCCAGCTCTA CGGCGGACGC GCGTACGAGC CGCAGGTCAA GGCGCTCGAG
CAGGGCGTCG AGGTCGTCGT CGGCACCCCG GGCCGCATGA TCGACCTCCT CAAGCAGGGG
TTCCTCGACC TCACCCGCGC CCAGTGCGTC GTGCTCGACG AGGCCGACGA GATGCTCGAC
CTCGGGTTCC TGCCCGACGT CGAGAAGCTC CTCGCCCGCA CCCCGGCCGT ACGCCACACG
ATGCTGTTCT CGGCGACCAT GCCGGGTGCC GTCGTGGCGA TGGCCCGTCG GTACATGAAG
CAGCCGACGC ACATCCGCGC GAACGACCCG GACGACGGCG GCCAGACCGT CAAGAACATC
AAGCAGGTCG TCTACCGCGC GCACGCCCTC GACAAGGTCG AGGTCCTCGC CCGCATCCTC
CAGTCGGAGG GTCGTGGCCT GTCGATCGTG TTCGCCCGCA CCAAGCGCAC GGCCGCGAAG
GTCGCCGACG AGCTCGCCGA CCGCGGCTTC GCCTCGGGTG CGATCCACGG CGACCTCGGC
CAGGGCGCCC GCGAGCAGGC GCTGCGCGCC TTCCGCTCGG GCAAGATCGA CGTCCTCGTC
GCGACCGACG TCGCGGCCCG CGGCATCGAC GTCGACGAGG TGACCCACGT GGTCAACTAC
CAGTGCCCCG AGGACGAGAA GACCTACCTG CACCGCACCG GCCGCACAGG CCGCGCGGGC
CACAAGGGCA CCGCCGTGAC CTTCGTGGAC TGGGACGACC TGCCCCGCTG GTCGCTCATC
AACAAGGCGC TCGACCTCGA CATCCCCGAG CCCGTCGAGA CGTACTCGAC GTCGCCGCAC
CTCTACACCG ACCTCGACAT CCCCGAGGGC ACCAAGGGCC GCCTGCCCCG GTCGGCCCAG
ACCCGCGCGG GTCTCGACGC GGAGGTCCTC GAGGACCTCG GCGAGACCGG CAAGCGCGGG
GCGGCCCGCC CGGCGCAGTC CGGCGGACGC GACTCCGGAC GCGGTGACGC CGGACGCGGT
GACTCGCGTC GCGACGGACG CTCGGGCGAG CGCTCCGGCG GTCGTGGTCA GGGTGGCCAG
GGCAGCCGTG GCGAGACCGG TCGTGGTCAG GGTGGTCGCG ACAGCGCACC CCGCGAGCAG
AGCACCGTCG AGACCGCCCC GCGCGAGCAG AGGACCGTCG AGACCGCCGC CGAGGCACCC
GCCGAGGGCA CGCGCCGTCC GCGGACCCGC CAGCGCACCC GCACCACGGG CACCGGCGCC
TCGGAGCAGG CGTCGACCAG CACCTCGACG AGCACCTCCT CGAGCGCCCC GGCGGCCACG
ACCGAGGGCG AGGGCGGTCG TCCGCGTCGT CGCCGTCGTC GTCCTGCCGG CTCGCAGGGC
TCGGAGCAGG GACGCAGCCC CGAGGCACCT GTCTCCGCCT GA
 
Protein sequence
MTSSTSSSVQ AADVTFGDFG VRPEIVQALA DAGIVAPFPI QAMTLPVAMA GHDIIGQAKT 
GTGKTLGFGV PLLHRVVAPG EPGYDELPAP GKPQALVIVP TRELAVQVAK DLEAASTKRS
VRIVQLYGGR AYEPQVKALE QGVEVVVGTP GRMIDLLKQG FLDLTRAQCV VLDEADEMLD
LGFLPDVEKL LARTPAVRHT MLFSATMPGA VVAMARRYMK QPTHIRANDP DDGGQTVKNI
KQVVYRAHAL DKVEVLARIL QSEGRGLSIV FARTKRTAAK VADELADRGF ASGAIHGDLG
QGAREQALRA FRSGKIDVLV ATDVAARGID VDEVTHVVNY QCPEDEKTYL HRTGRTGRAG
HKGTAVTFVD WDDLPRWSLI NKALDLDIPE PVETYSTSPH LYTDLDIPEG TKGRLPRSAQ
TRAGLDAEVL EDLGETGKRG AARPAQSGGR DSGRGDAGRG DSRRDGRSGE RSGGRGQGGQ
GSRGETGRGQ GGRDSAPREQ STVETAPREQ RTVETAAEAP AEGTRRPRTR QRTRTTGTGA
SEQASTSTST STSSSAPAAT TEGEGGRPRR RRRRPAGSQG SEQGRSPEAP VSA