Gene Sked_27730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_27730 
Symbol 
ID8634407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3091979 
End bp3093211 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content72% 
IMG OID 
Producttranscriptional regulator/sugar kinase 
Protein accessionYP_003315509 
Protein GI269796054 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.514205 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGGC GGACCGCACG TGACCTGCGC TCCGACAGCC GGTCGGCGGT GCTGCGGGCG 
TTCTTCAGCC TGCGCACCGC CACCCGGCAG GAGCTGTCCC AGCACACCGG GCTGAGCGTC
GCGACCGTCT CGACCCTCGT CAAGGAGTTC CTCACCGCAG GCGTCGTCCA CGTCGAGGCC
GTCGTCTCCT CCGGGGTCGG CCGCCCCCTC GAGCAGCTGC GACTCGACCC CTCCCGCGGC
TACATCGTCG GGGTCGACGT CGCCGAGACC TACGTCGAGA CGACCGTCTT CGACCTCAGC
CTGGACCCGC GCGGCACCGT GTCCGTCCCG CTCGACGAGC ACCAGAACTC GCCGCAGTAC
GTGGTCGACG GCATCCGCCT CGCGGTGCAC GGGGTGCTCG CGCTGGCGGG CGTCAGCACG
TCGTCGGTCG TGGGGGTCGG GGTGAGCCTC CCGGGGCAGG TCCAGCCCGA CCTCGGCGTC
TCCGTCTTCG CGCCGAACTG GGCCTGGCAC GACGTCCGGA TCAAGGAGCT GCTCACCGCC
GAGCTCGGCA TGCACGTGCA CGTCGACAAC CCGCTCAAGG CCATCGCGGT CGCCGAGCTG
TGGTTCGGAG CCGGGCGCGA GCACCGCGAC CTCGCGATCG TCAACCTCGG CACGGGCGTC
GGCTCGGGGT TGGTGATCAA CGGCGAGCTG GTCCGTGGCG TGAGCAACAA CGCCGGCGAG
TGGGGGCACA CCCTGCTCGC GCTCGACGGG CGCCTGTGCC GCTGCGGGCG GCAGGGGTGC
GTCGAGGCGT ACGTCGGGGT GAACGGGATG AAGGCGACGC TCTCGGAGAT CCAGCCGGAC
CACCCCGCGC TGCTGCAGCA GGAGCAGCGC CGGTTCGTCG ACGCCGTCTA CGAGGGTGTG
GTGGCCGGTG ACCCGGTGTT CGTCGAGCTC GTCGACGAGA CGGCCCGGTA CCTCGCGGCG
AGCCTCGGCG ACCTCGTCAA CATGATCAAC CCCGAGCACG TGGTCCTCAC CGGGTGGACG
GTCGCGCGCC TCGGCGACTG GCTCATCCCG CTGGTCCGCG CCAAGATCCC GGACGCCGCG
CTGCGGTCCA GCGTCGCCGT CCTGACCGTC AGCGCGTCGT CCCTGGCGTC GAGCACCGTG
GCCCTGGGCA TGAGCACGCT GACCCTCGAG CACTTCCTGG CGGCCGTCGG GCTGCCGAGC
CGCACCGGGC CGGCACCGGC TCAGCAGGGC TGA
 
Protein sequence
MTRRTARDLR SDSRSAVLRA FFSLRTATRQ ELSQHTGLSV ATVSTLVKEF LTAGVVHVEA 
VVSSGVGRPL EQLRLDPSRG YIVGVDVAET YVETTVFDLS LDPRGTVSVP LDEHQNSPQY
VVDGIRLAVH GVLALAGVST SSVVGVGVSL PGQVQPDLGV SVFAPNWAWH DVRIKELLTA
ELGMHVHVDN PLKAIAVAEL WFGAGREHRD LAIVNLGTGV GSGLVINGEL VRGVSNNAGE
WGHTLLALDG RLCRCGRQGC VEAYVGVNGM KATLSEIQPD HPALLQQEQR RFVDAVYEGV
VAGDPVFVEL VDETARYLAA SLGDLVNMIN PEHVVLTGWT VARLGDWLIP LVRAKIPDAA
LRSSVAVLTV SASSLASSTV ALGMSTLTLE HFLAAVGLPS RTGPAPAQQG