Gene Sked_27440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_27440 
Symbol 
ID8634378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3054401 
End bp3056446 
Gene Length2046 bp 
Protein Length681 aa 
Translation table11 
GC content75% 
IMG OID 
Productdipeptidyl aminopeptidase/acylaminoacyl peptidase 
Protein accessionYP_003315481 
Protein GI269796026 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCCG CTGACCTCTC CCTGCTCCGC GCCCCCGGGG CGCCCTCGCT CTCGCCCGAC 
GGCACCTTCG CCGTGGTGGC CCGGATCGCG CCCGACCTCG AGACCGACGA GTACACCGGC
CAGGTCTGGC GCGTGAGCGT CGAAGGCTCG ACCGCCCCGG TCCGCCTCAC CCGCGGGCAC
CGGGACACCG ACCCGCAGGT GTCACCCGAC GGGCGCTGGG TCGCGTTCCT GCGTGCCGAG
CCGAAGGGCC GCCCGCAGGT GCACCTCGTC GAGGCGGTGG GTGGTGAGCC GGTCCGGTTG
ACCGACGCGC CGCTCGGAGC CCAGGCGCCG CAGTTCAGCC CGGACGGCTC GAGCCTCGCC
TTCCTCGCCC GCGTCCCCGA CGAGGGGCGC TACGTGGTCG ACGGGAACCC CGCTGCGGAG
CGCCCGCGGC ACATCACCGA GCTCACCTAC CGCCACGACG GGGTCGGGTT CACGCACGAC
AAGCGCCGTC AGCTGTTCGT GGTCGACGTC CCTGCTGACC CCGAGGCACG CTCGCTCGTC
GCCGAGGACG GGACGAGCGG GTCGGTCGCC CGGCAGGTGA CCTCGGGCGA CGTCGACCTC
TCGAGCGCGC TCTGGCTGTC CGACGGTCGC CACGTGGTCG TGGTGGCGGC CCGGCACGCT
GGACGGCACC AGGACCGGCG CTCTGACGTC GTGGTGATCG ACACCGCGGC CGACGGCGAC
GGTGCGCTGC ACCCCCTGAC CGACGCGGAC GCAGGCTCGA CGCTCGCGGT GGCTGCAGCC
GTGCCGACGT CGGACGGCGC CGGGTTGTGG GTGCTCGCCC AGGACATGGG CCCCTCGGGG
CGTGACTTCG TGGCGCGGCA GACCGGGCTC TTCCACCTGC CGCTGCAGAC GGACGCCGAC
GGGCGGCCAG CGGCGGCCGG GCTGCCGCAG CGCCTCACCG ACGAGGAGGC CGTCGACCTC
GACCCGTCGA CCGTCGCCGC GACGCCCGAC GGTGTGCTCG TCGGGCGGCT GGAGCGCGGG
ACCGTGGTGC TCGACGAGCT GCGTGCTGAC GGTGCCGCGC GCGAGCTCGT CGGCGGGTCC
GTCGTGGTGC ACGGCGTCTC GACGGCCGCG GGGCGCGCGG TCGTGACGGT CGCGGGCCCG
AGCACCTCGG GCGACGTCTA CGCGGTCGAC CTCGGAGACG GCGGGTCGCG GACGCTCACC
GACTGGTCCG AGCCCCTGCG CGCGACCGGA CGGGTGCGCG AGCCCGTCGA GATCACCACG
ACCGCCCCTG ACGGGTATCC CGTCCACGGC TGGGCGGTCA CACCGGACCC TGAGCGCTTC
GGTGCCGGAC CGCACCCGAC GATCCTCATG ATCCACGGCG GGCCGTTCGC GCAGTACACG
GTCGCGCTCT TCGACGAGGT CCAGACGCTC GCAGGCGCCG GGTACGCCGT CGTCTACGGC
AACCCGCGCG GCGCAGCCGG CTACGGCGGG GCCCACGGCG CGGCGATCCG GCACGCCTTC
GGCACCGTCG ACACCGACGA CGTGCTGGCG CTCCTCGAGG CCGCGCTGGC CGACCCGGCG
CTCGACGCCG ACCGGGTGGG CGTCATGGGC GGGTCCTACG GCGGCTACCT CACGGCGTGG
CTCACCACCC GGACGGACCG CTTCGCGGCG GCTGTCGTCG AGCGCGGGTT CCTCGACCCG
GTGAGCTTCG TCGGGTCGAG CGACATCGGG TGGTTCTTCG GGCTCGAGTA CCTCGGCGAC
GGAGACACGG ACGAAGACCG TGCTCGGGTC GCCGCGCAGT CGCCCATGGC GCACGTGGCA
CAGGTGACGA CCCCGACCCT CGTGATCCAC TCCGAGCAGG ACTGGCGGTG CCCCGTCGAG
CAGGGGCAGC GGTGGTTCGT CGAGCTCAAG CGCCGCGGCG TCGAGGCCGA GCTGCTGCTG
TTCCCGGGGG AGGGGCACGA GCTCACGCGC TCGGGCCGCC CCCAGCACCG GCTGGTGCGG
CTCGAGCACG TGCTCGCCTG GTGGGAGCAG CAGCTGCCGG TGCCGGGTCG CGGCGAGACC
GCCTAG
 
Protein sequence
MIPADLSLLR APGAPSLSPD GTFAVVARIA PDLETDEYTG QVWRVSVEGS TAPVRLTRGH 
RDTDPQVSPD GRWVAFLRAE PKGRPQVHLV EAVGGEPVRL TDAPLGAQAP QFSPDGSSLA
FLARVPDEGR YVVDGNPAAE RPRHITELTY RHDGVGFTHD KRRQLFVVDV PADPEARSLV
AEDGTSGSVA RQVTSGDVDL SSALWLSDGR HVVVVAARHA GRHQDRRSDV VVIDTAADGD
GALHPLTDAD AGSTLAVAAA VPTSDGAGLW VLAQDMGPSG RDFVARQTGL FHLPLQTDAD
GRPAAAGLPQ RLTDEEAVDL DPSTVAATPD GVLVGRLERG TVVLDELRAD GAARELVGGS
VVVHGVSTAA GRAVVTVAGP STSGDVYAVD LGDGGSRTLT DWSEPLRATG RVREPVEITT
TAPDGYPVHG WAVTPDPERF GAGPHPTILM IHGGPFAQYT VALFDEVQTL AGAGYAVVYG
NPRGAAGYGG AHGAAIRHAF GTVDTDDVLA LLEAALADPA LDADRVGVMG GSYGGYLTAW
LTTRTDRFAA AVVERGFLDP VSFVGSSDIG WFFGLEYLGD GDTDEDRARV AAQSPMAHVA
QVTTPTLVIH SEQDWRCPVE QGQRWFVELK RRGVEAELLL FPGEGHELTR SGRPQHRLVR
LEHVLAWWEQ QLPVPGRGET A