Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_27360 |
Symbol | |
ID | 8634370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 3044197 |
End bp | 3045861 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | glycosidase |
Protein accession | YP_003315474 |
Protein GI | 269796019 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.155559 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.548604 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCGCACG AGGACGAGAC GACCGACCCC ACCTGGTGGC GGAACGCGGT CATCTACCAG ATCTACCCCC GCAGCTTCGC GGACGGGAAC GGCGACGGGA CCGGCGACCT CGCCGGCGTC CGGGCACGCC TGCCGTACCT CAAGGAGCTC GGCGTCGACG CCGTCTGGTT CACCCCCTGG TACCAGTCGC CGCTCGCCGA CGGCGGATAC GACGTCGCCG ACTACCGCAC CATCGACCCG GCCTTCGGCA CCCTCGCCGA GGCCGAGGCG CTCGTCGCCG AGGCCCTCGA GCTCGGCATC CGCACGATCG TCGACGTCGT CCCCAACCAC GTGTCCGACC AGCACGAGTG GTTCCAGGCC GCGCTCGCCG CCGGCCCGGG CTCTCCCGAG CGCGAGCGTT TCTGGTTCCA CCCGGGCAAG GGAGACGACG GCTCGGAGAT CCCCACGCAC TGGGTGTCGA GCTTCGCGGG CAGCACCTGG ACCCGCACCT CCGACGCCGA CGGGACGCCG GGGGAGTGGT ACCTCCACCT CTTCACCCCG GAGCAGCCCG ACCTCAACTG GTCGCACCCC GACGTGCGCC GCGAGCACGA GGACGTCCTG CGCTTCTGGT TCGACCGCGG CGTCGCCGGC ATCCGCATCG ACTCGGCCGC CCTGCCGGTC AAGGACCCCG CGCTCCCCGA GGTGCCGGCC GACCCCGCTC CGGGCGAGCA CCCGCACCTC GACCGCGACG AGCTCCACGA CGTCTACCGC GGCTGGCGTG CCGTCGCCGA CTCCTACGAG GGCACCCGCG TGCTCGTCGG GGAGGTCTGG CTGGACGACA CGGCACGGTT CGCGCAGTAC CTGCGCCCCG ACGAGATGCA CACCGCCTTC AACTTCGACT TCATGGGTCG TCCGTGGGAG GCCACGCAGC TGCGGGCCTC GATCGACGCC ACGCTCGCCG CGCACGCACC GGTCGGCGCC CCGGCCACCT GGGTGCTCTC CAACCACGAC GTCACCCGCC CCGTCACCCG GTACGGCCGC GAGGTGAGCT CCTTCGCCTT CGCCGACAAG CGGTTCGGCA CCCCGACCGA CCTCGACCTC GGCACCCGGC GCGCCCGCGC GGCGGCCCTC CTCACCGCCG CGCTCCCCGG CTCGCTCTAC CTCTACCAGG GTGACGAGCT CGGCCTGCCC GAGGTCGAGG ACCTCCCGCT CGACGTGCTC CAGGACCCGA TGCACTTCAG GTCCGAAGGC GTCGACCCCG GTCGCGACGG GTGCCGCGTC CCGCTGCCCT GGTCGGGCGA CGCGCCCTCC TTCGGGTTCA GCCCCGAGGG GGCTGCCGCG ACCTGGCTGC CGCAGCCCGA CGCCTGGGCC TCGCTGACCG TCGAGGCGCA GGAGAAGGAC GACGCCTCGA TGCTGCACCT CTACCGCAGC GTGCTCGCCA CGCGGTCGAC CGACCCCGAC CTCGCCGGGG AGTCCTTCGC CTGGCTCGAC GCCGCGACGG CGGGGGACGA CGTGCTCGCC TTCGTCCGCG GCGAGCGCCT GGCCTGCGTC GTGAACCTCG GTCCCACGCC TGTCGCGCTG CCCGAGCACG ATGCCGTGCT GCTCGCCTCG GGACCGCTCG ACGGCGACCG GCTGCCGCAG GACACCGCGG TCTGGCTCCG CCTGTCCGCC GAGGTCACGG CGTGA
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Protein sequence | MSHEDETTDP TWWRNAVIYQ IYPRSFADGN GDGTGDLAGV RARLPYLKEL GVDAVWFTPW YQSPLADGGY DVADYRTIDP AFGTLAEAEA LVAEALELGI RTIVDVVPNH VSDQHEWFQA ALAAGPGSPE RERFWFHPGK GDDGSEIPTH WVSSFAGSTW TRTSDADGTP GEWYLHLFTP EQPDLNWSHP DVRREHEDVL RFWFDRGVAG IRIDSAALPV KDPALPEVPA DPAPGEHPHL DRDELHDVYR GWRAVADSYE GTRVLVGEVW LDDTARFAQY LRPDEMHTAF NFDFMGRPWE ATQLRASIDA TLAAHAPVGA PATWVLSNHD VTRPVTRYGR EVSSFAFADK RFGTPTDLDL GTRRARAAAL LTAALPGSLY LYQGDELGLP EVEDLPLDVL QDPMHFRSEG VDPGRDGCRV PLPWSGDAPS FGFSPEGAAA TWLPQPDAWA SLTVEAQEKD DASMLHLYRS VLATRSTDPD LAGESFAWLD AATAGDDVLA FVRGERLACV VNLGPTPVAL PEHDAVLLAS GPLDGDRLPQ DTAVWLRLSA EVTA
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