| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_27300 |
|---|
| Symbol | |
|---|
| ID | 8634364 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 3036866 |
|---|
| End bp | 3038173 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | Na+/melibiose symporter-like transporter |
|---|
| Protein accession | YP_003315468 |
|---|
| Protein GI | 269796013 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.566046 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.31967 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGGTCGA CGCCGACCCC TGCCTCGACG ACAGCCCGAT CGGCGCTGCG CTCCCCCGGG
TTCCGGCTGC TCACCGTCGC CTGGGGCTTC ACCAACTTCG CCGACTCGGT CCTCGCGCTC
ATCCTCGCCG TCTGGGTCAA GGACCTCACC GGGTCCGACA GCCTGGGTGG CCTCGTGTTC
GCCGCGCTCG GGCTCCCGGC GCTCGTCTCG CCGCTGCTCG GCCAGGTGGC CGACAGGGTC
TCCCGTCGCC GGATGATGAC CGCCACCTAC ACCACCGGCG CCGTGAGCCT GCTCGCCCTC
TTCGCCGTAC AGGGCCCGCG CGACGTGTGG GTCGTGTTCG CCGTGACCGT CATCTACTCC
CTCGTCGGCT TCGCGACGAC CGCCGCGCAG TCGGGTCTCG TCCGCGACAT GCTGCCCGAC
GAGGCGCTGG CCGCGGCCAA CGGTCGGCTG ACCACCATCG ACCAGGTGTT CCGGCTGACC
ATGCCGCTGC TCGGCGCCGG CGTCTACGTG GCCACCGGAC CGCTGCCGCT CGTCACCGCG
GCAGCCGCCT CCTTCGCGGT GGCCGCCGTG GTGGTCGCCA GGATCCGTCT CGTCGAGACC
CCGCCGACCG CACGCGACGA GCGCGAGCCG TTCCGCACCG AGGTGACGGC CGGGTTCCGG
CACCTGCTGC GCACCCCGCC GCTCGGCGCG CTCACCGTGG CGCTCCTCGT GGCCTGCGGC
GCGGTCGGGC TGCTCAACGC CTCGAGCTTC GCGATCATCG ACCAGGGGCT CGGGCTCGGT
CCAGAGATGC TCGGACCGGT GTCGAGCGTG CAGGGCGCCA CCGCGATCGT GGCGGGTCTC
ACCGCGGCGC GGCTCGTCGC CCGGTGGGGG TCACCTCGCC TGGTGACCGT CGGGCTCGGG
GCCGTCGCGC TCGGGGTGCT CCCGGCGCTG GGCAGCAGCC TGGTGGGCGT GCTGCTCGGG
CTCGGCCTCG TGGGCCTGGG CATGACGTGG GCGATCGTCG GCTTCGTCAC CGAGCGGCAG
CTGAGGACGC CGCCCCGGCT CCAGGGGCGC GTCTCGGCCG CGACCAACAT GCTGCTCAAC
GTGCCTCAGC TCGCGCTCAC CGTCGTGGGG GCCTCGCTCC TCGGCCTCGT CGACTACCGC
GTGCTGCTCG TCGTCACCGT GCTGGGCATC ACCGCGGGTG CCGCGGTCGC GCTCCGCGAG
GCCGCGCGGA CGCACCGGGC TCCCCCCTCG GTCGCGGCCG ACCCGCCCGC GACCGACCCA
CGCACGACGC CCGCCACCCC CGACCGGGCG GGCAGCGGGC CCCTGTGA
|
|---|
| Protein sequence | MRSTPTPAST TARSALRSPG FRLLTVAWGF TNFADSVLAL ILAVWVKDLT GSDSLGGLVF
AALGLPALVS PLLGQVADRV SRRRMMTATY TTGAVSLLAL FAVQGPRDVW VVFAVTVIYS
LVGFATTAAQ SGLVRDMLPD EALAAANGRL TTIDQVFRLT MPLLGAGVYV ATGPLPLVTA
AAASFAVAAV VVARIRLVET PPTARDEREP FRTEVTAGFR HLLRTPPLGA LTVALLVACG
AVGLLNASSF AIIDQGLGLG PEMLGPVSSV QGATAIVAGL TAARLVARWG SPRLVTVGLG
AVALGVLPAL GSSLVGVLLG LGLVGLGMTW AIVGFVTERQ LRTPPRLQGR VSAATNMLLN
VPQLALTVVG ASLLGLVDYR VLLVVTVLGI TAGAAVALRE AARTHRAPPS VAADPPATDP
RTTPATPDRA GSGPL
|
|---|
| |