Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_27230 |
Symbol | |
ID | 8634357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 3029782 |
End bp | 3032187 |
Gene Length | 2406 bp |
Protein Length | 801 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | subtilisin-like serine protease |
Protein accession | YP_003315461 |
Protein GI | 269796006 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0273209 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.322238 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGGCA ACCGGCCGTC GCAGCAGACT CGAGAGACGT GGACCATGCC CGCCCCCCTC CCCGCACCAC ACCGAATCGG TGCTGTCGTC GTCACGACGG CACTCGCCGT CGGATGGATC ACCCTCCCCG CGCACGCCCA GACCTCCGAC GCCGTGCAGC CGACCGCGAC GCAGGGCGAG ACAGCACCGG AGACGGGCTC GCCCTCCGAC ACCCCGCTCG ACCCGACCGC CCCGGAGGCC GCGCTCGAGC CCACCGAGCC GTCGGAGCCG ACAGAGCCCT CGACCACGGA CGAGACTGCG CCGCTGGCGG ACCCTGAGGT CACGGCGCCC GCTGCGGACG ACGCCCCGGC GGCACCGACC GACGCGTCGC CGTCCGAGCC CACCCCGCGC GAGGTCACGG CTGACGAGGC CGACCCCGCG CCGAGCGACG CCCCGGCACC CGGCACGGAC CCCACCGACG TCCCCACGCT CCCCGCCGCG GGTGACGACG AGGTCACCAC GTGGCTCGTC GAGGTCGACC CGGCCCACGA CCCGGTCCCG GCAGAGCTCG CGACCGAGGA CATCACCGCC GTCCACGAGT ACGAGGACGC GCTGCAGGGC TACGCCGTCG AGGCCACCGC GGACCAGATC GAGGCGCTCG CCGACGTCGA GGGCGTCCTG AGCGTCGAGC CCGACCTGCC CGTGTCCATC GACGAGAACT CGACGCAGGA CCGTGCCCCC TGGGGTCTCG ACCGCGTCGA CCAGGCCACC CTCCCCCTCG ACGGACGGTT CACCTACCCC CGGACCGCCG GGTCCGGCGT CCGCGTGTAC GTGGTCGACA CCGGGGTCGA GCGGACCCAC ACCGAGTTCG GCGGGCGGGT GACCGCCGGG TTCAACGCCC TCCCGGACGG CGTCGCGACC GCAGACTGCA ACGGGCACGG CACCCACGTC GCCGGGACCG TCGCGTCGCG CACCTACGGG GTCGCCAAGT CCGCGACCAT CGTGCCGGTG CGGGTGCTCA AGTGCGGTGG GTCCGGGAGC GTCTCGGACG TCATCCGCGG GCTCGACTGG ATCGTCGCGA ACCACCCGAA GGGCACCCCG GGCGTCATCA ACATGTCGCT CGGCGGCGGG ACCAGCTCCG CGCTGACCCG CGCCGTCGAG GCGGCCACCG CCTCCGGCCT GCTCGTGGTC GTCGCCGCCG GCAACTCGAA CAGCGACGCC TGCCTGTCGT CGCCCGCGTC GGCGCCCTCG GCGCTCACGG TCGCCGCGAC CACCATGACC GACACCCGCG CCTCGTTCTC GAGCTGGGGT CGCTGCGTCG ACGGCTTCGC GCCCGGCGCG CGGATCGTCT CGACCATCCC CGGGAACGGC ACCGGCACCA AGTCGGGTAC CTCGATGGCC GCCCCGCACG CTGCCGGCCT CGCGGCCCTG CTGCTGTCCG ACACCCGCAC GCTCACGCCG AGCCAGGTGA CCGAGCGTCT CGAGGCGAAC AGCGGGCGTG GCGTCAAGGA CGCCGGCCCC GGCAGCCCGA ACCGCATCTT CGGCGTCGGC TCCGCGCCCT CGACCACGCG CCCGGGAGCA CCCGCACCCG GCGTCCCCAC GAAGATCGTC GCGTCGAAGG TCGGGACCAC CGCGGCGACG GTGACCTGGA CAGCACCCGC GGGCACCGCA CCGACCGGGT ACAGCGTGCA GCACTCGACG AACGGCACCA CGTGGTCGAA GGCCGTGACC GTCACCAACA GGTCGATCCG GCTGACCGGC CTCAAGGCGA GCACCACCTA CACCGTGCGC GTCAAGGCGC TCGCCGGCAG CGCCACGAGC GCCTGGGCCA AGGCCAGCAT CAAGACCGCT CCCCGCCCGT CGGCCGTGCG GTCGCTCAAG GTGACCTCAC GAGCGCCGTC GACCGTCGGC CTGAGCTGGG GCGTCCCGGC GACCTCCGCG GCCCTGGTCG TGGACTACAC GATCGAGACG TCCCGCGACG GCAAGACGTG GACCACCTAC GCCGACGGCG TGAGCACGAA GACCTCGACG ACCGTCCGCA AGCTCGCGCC CGGGGTGGCG TACACCTTCC GCGTCACCGC GGTCGCCGAC GGCAAGACCA CCGGAGCCGC GACGACGGTC CGCGCGAAGA CGCTGGCGGC CCCCTCTGCG CCGCGCTCCG CCAAGGTCAC CGCACGGGCG GCGACCACCC TGTCGCTCTC CTGGCAGGCC CCGAAGACCT CGGGCGCGCA GGTCACCGGT TACCGCGTGC AGGTCTCGCG CGACAAGCGC ACCTGGACCA CCGTGACCGA CGGCAGCAGC TCGGCCCGCA CCGCCAAGGT CACCGGCCTG AAGAAGGGCA CGCCGTACAC CGTGCGCGTC CTCGCCAAGT CCGGCACCTC CTGGGGCACC GGCTACGCCA CCCTCTCCAC CTCGACACGG AAGTAG
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Protein sequence | MSGNRPSQQT RETWTMPAPL PAPHRIGAVV VTTALAVGWI TLPAHAQTSD AVQPTATQGE TAPETGSPSD TPLDPTAPEA ALEPTEPSEP TEPSTTDETA PLADPEVTAP AADDAPAAPT DASPSEPTPR EVTADEADPA PSDAPAPGTD PTDVPTLPAA GDDEVTTWLV EVDPAHDPVP AELATEDITA VHEYEDALQG YAVEATADQI EALADVEGVL SVEPDLPVSI DENSTQDRAP WGLDRVDQAT LPLDGRFTYP RTAGSGVRVY VVDTGVERTH TEFGGRVTAG FNALPDGVAT ADCNGHGTHV AGTVASRTYG VAKSATIVPV RVLKCGGSGS VSDVIRGLDW IVANHPKGTP GVINMSLGGG TSSALTRAVE AATASGLLVV VAAGNSNSDA CLSSPASAPS ALTVAATTMT DTRASFSSWG RCVDGFAPGA RIVSTIPGNG TGTKSGTSMA APHAAGLAAL LLSDTRTLTP SQVTERLEAN SGRGVKDAGP GSPNRIFGVG SAPSTTRPGA PAPGVPTKIV ASKVGTTAAT VTWTAPAGTA PTGYSVQHST NGTTWSKAVT VTNRSIRLTG LKASTTYTVR VKALAGSATS AWAKASIKTA PRPSAVRSLK VTSRAPSTVG LSWGVPATSA ALVVDYTIET SRDGKTWTTY ADGVSTKTST TVRKLAPGVA YTFRVTAVAD GKTTGAATTV RAKTLAAPSA PRSAKVTARA ATTLSLSWQA PKTSGAQVTG YRVQVSRDKR TWTTVTDGSS SARTAKVTGL KKGTPYTVRV LAKSGTSWGT GYATLSTSTR K
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