Gene Sked_27060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_27060 
Symbol 
ID8634340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3018352 
End bp3020022 
Gene Length1671 bp 
Protein Length556 aa 
Translation table11 
GC content70% 
IMG OID 
ProductK+-transporting ATPase, KdpA 
Protein accessionYP_003315444 
Protein GI269795989 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.465729 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATGA GCGAGACCTG GACAGCCGTC GGGCAGATCT CCCTGCTCGT CGCGGCCCTC 
GCCGCGGTGC ACCTGCCGCT CGGCGCCTAC CTGGCCCACG TGTACACCTC GCCGCGCCAC
CTGCGGGTCG AGCGCCTCGG CTACCGCGTG ATGCGCGTCG ACGCCGACGC CGAGCAGCGC
TGGACCTCGT ACCTCTTCTC GCTGCTGGGC TTCTCCCTCG TGTCCCTGCT CGCCCTGTAC
GCGATGGGCC GCCTGCAGGA GCACCTGCCG ATGAACCTCG GCGTCAGCGC CTTCGACCCG
GCGGGCGCGT GGAACACCGC GGTGTCCTTC GTGGCGAACA CCAACTGGCA GTGGTACTCC
GGTGAGGCGG CGGCCGGGCA CGTCTTCCAG ATGGTCGGCC TCGCCGTGCA GAACTTCGTC
TCGGCGGCGG TCGGCATCTC GGTCGCGATC GCCCTGGTCC GCGGCTTCGC GCGGTCGGGG
ACGGACGGGC GGGTCGGCAA CTTCTGGTCC GACCTCACCC GCACCTGCGT GCGCGTCCTG
CTGCCGATGT CGCTGCTCGC TGCGGTCGCA CTGCTGGCGA CCGGCGTGAT CCAGAGCTTC
GACCCGCACA CCGCGGTCCA GACGGTCTCG GGCGGTTCGC AGCACCTGCT CGGCGGCCCG
GTCGCCTCGC AGGAGGCGAT CAAGGAGCTC GGCACCAACG GTGGTGGATT CTTCAACGCT
AACTCGGCAC ACCCGCTCGA GAACCCGAGC CCGGTGAGCA ACCTGCTCGA GATCTTCCTG
ATCCTCGTCA TCCCCTTCAC GCTGCCGCGC GCTTTCGGCC TCATGGTGCG CGACACCCGT
CAGGGCTTCG CGATCGTCTC GGTGATGGGC TCGCTGTTCC TCGCCGGGAC GGCGCTGCTC
ACCTGGGCGG AGATGTCCGG CCCCGGCCTC GCCGCCCAGG CCGCGGGTGG TGCGCTCGAG
GGCAAGGAGC TGCGCTTCGG CACGGCCGGG TCGGCGCTCT TCGCCGCAGC GACCACCGGC
ACGTCGACCG GCGCGGTCAA CGCCATGCAC GACTCGCTCA CCGCGCCGGG CGGTGGGATC
GCCACCTTCA ACATGCTGCT GGGGGAGATC GCGCCGGGAG GTGTCGGGTC CGGCCTCTAC
GGCATGCTCG TCCTCGCGAT CGTCGCGGTG TTCATCGCCG GGCTCATGGT CGGGCGCACG
CCCGAGTACC TCGGCAAGAA GATCGGGCGG CAGGAGATCA CCCTCGTCGC CCTCTACATC
CTCACCGTGC CGCTGCTGGT GCTCGTCGGC ACCGCCCTCG CGATCTCGCT GCCCGCCGGG
CAGGCCGGGA TCCAGGAGGC CGGTCCGCAC GGTCTCTCCG AGGTGCTCTA CGCGATGACG
TCGGCGGCGA ACAACAACGG CTCGGCCTTC GCCGGTCTCA CCACCGCCAC GCCCTTCTAC
AACACGCTGC TCGGCGTCCT CATGCTCGTC GGGCGCTTCG TGCCCATCGC CCTCGTGCTG
GCGCTCGCGG GCAGGTTCGC CAGCCAGAAG ACCGTCCCCG CGACCGCAGG CACCCTGCCC
ACGCACCAGC CGCTCTTCGC AGGGCTGCTC GGGTCTGTCG CGCTGGTCGT CGTCGGTCTC
ACCTTCATCC CCGTCCTGTC CCTCGGTCCG ATCGTGGAGT CGCTCTCATG A
 
Protein sequence
MTMSETWTAV GQISLLVAAL AAVHLPLGAY LAHVYTSPRH LRVERLGYRV MRVDADAEQR 
WTSYLFSLLG FSLVSLLALY AMGRLQEHLP MNLGVSAFDP AGAWNTAVSF VANTNWQWYS
GEAAAGHVFQ MVGLAVQNFV SAAVGISVAI ALVRGFARSG TDGRVGNFWS DLTRTCVRVL
LPMSLLAAVA LLATGVIQSF DPHTAVQTVS GGSQHLLGGP VASQEAIKEL GTNGGGFFNA
NSAHPLENPS PVSNLLEIFL ILVIPFTLPR AFGLMVRDTR QGFAIVSVMG SLFLAGTALL
TWAEMSGPGL AAQAAGGALE GKELRFGTAG SALFAAATTG TSTGAVNAMH DSLTAPGGGI
ATFNMLLGEI APGGVGSGLY GMLVLAIVAV FIAGLMVGRT PEYLGKKIGR QEITLVALYI
LTVPLLVLVG TALAISLPAG QAGIQEAGPH GLSEVLYAMT SAANNNGSAF AGLTTATPFY
NTLLGVLMLV GRFVPIALVL ALAGRFASQK TVPATAGTLP THQPLFAGLL GSVALVVVGL
TFIPVLSLGP IVESLS