Gene Sked_26880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_26880 
Symbol 
ID8634322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2999198 
End bp2999770 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content74% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003315426 
Protein GI269795971 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.196788 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.896708 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCTCA CCACTGCTGT CGTGCTGCTG CGCGGCGTCA ACGTCGGCGG GCACCGCAAG 
GTGCCGTCTG CCGACCTGCG CGCGATCGGC GAGACCGCCG GCTGGACGCG CGTCACGACC
ATCCTCGCGA GCGGGAATCT CGTGGTCTCG GCCCCGGCGC CCGGCACTCC GGCTGCCTCG
TGCCGCACGG AGGCAGAGGT CGCCGCGCTC GTCCACGGCG GGCTGCTGGA CCGGCTGGGC
CTCGACGTCG ACGTGGTCGT GGTCTCGCCC GAGACCCTCG ACTCCGTGGT CGCCCACCTC
CCCTTCCCGG CCGAGGCCGA GAGCGCGCCG TCGAAGCTCC TCGTGACCTT CTACGCCACC
CCGCCGACCG CCGACGCCAT CGCATCGCTC GACATGAGCC CCCACCCCGA GCGCATGGCG
TGGCACGAGG GGACGTCGTA CACCGTCTAC CCGGACGGAG CCGGCACCAC GAAGCTCAGC
CCCGCGCTGC TGCGCCGCAC GCTCGGCGTC GACGGGACCG CCCGGAACTG GACGACCGTC
CTGCGTCTGC GCGACCTCAC CGCCGCCGGC TGA
 
Protein sequence
MTLTTAVVLL RGVNVGGHRK VPSADLRAIG ETAGWTRVTT ILASGNLVVS APAPGTPAAS 
CRTEAEVAAL VHGGLLDRLG LDVDVVVVSP ETLDSVVAHL PFPAEAESAP SKLLVTFYAT
PPTADAIASL DMSPHPERMA WHEGTSYTVY PDGAGTTKLS PALLRRTLGV DGTARNWTTV
LRLRDLTAAG