| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_26820 |
|---|
| Symbol | |
|---|
| ID | 8634316 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 2992135 |
|---|
| End bp | 2993193 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003315420 |
|---|
| Protein GI | 269795965 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.873758 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGCTCGC AGTCTGCTCT GGGACGGTCG ACGGCCTCGG TGCCGAGCGG CAGGGTGGAG
CGGACCAGGG CTCTCGGATG GATCGCCGTC GTGGTCGTCG CGATGGCAGC GGTCTTGTCG
CTCGCTACCG GGGTGCTCGG CTGGTCCGGC GAGAAGGGGA TCGCGCAGGT CGTCGCGCTG
CGCACCTGGC TCCTGTGGGG CTTCGCCAGC ATGGCTGTCG TGGCGCTGCT CACCGCGCTC
GTGATCGGCT CTCGCGGACG GCGCCCAGCC CGCACGATCT CCGTCGCCCT CGTGTGCGCG
CTCGCGGCAG GCTCGCACCT GCTCGTGCTC GACTCCCGTG GTCTGGATGC GGGCCTCCCC
CTGGACGCCG CTGACGAGCG CGACGGCGAC ATCACCGTGC TCACGGCCAA CGTCCGGGGC
GAACGCGCGG GGGAGGAGAC CGTCTCGGCC ATCGTCGATC TCATCATCAG CAGCGGAGCC
GACGTCGTCG CGCTCCCCGA GGGGCAACCC GTCGTCGACG AGGTGGTCGC GCAGCTCATC
GGCCACGGCG AGTCCTTCCA GTCCTTCCCT GCTTTCGGCG CCGGACCCAA CCGGGGCACC
GCCCTGCTGG TCGCAGAGTC GCTGGGCACC TATCGCGAGG TCGACGGGCC TGTCGGAGGA
GTCCGGGTCG TGCCGGTCGA CGGCGACGGC CCGCCGATCG CCGCAGTGCA CCCGACCTCG
TTGCCCCCGG ACCCGACCGC CGACCTGGGG GCGTGGCGCA GCGAAGGCTC TCAGCTGCGC
GCGCTCTTCC GGACCATGAC GGGCGGCATC GTGGCCGGTG ACATGAACGC CACGCTCGAC
CACCAGCAGC TGCGCGAGAC CGGCACCTAC GTCGACGCCG GCTCGGCTGC CGGGATCGGC
GGGTACGGCA CGTTCCCGAG CTCTCTGCCC GGCGTGCTCG GGACGGCCAT CGACCACGTG
CTCGTCGACC GGGGGCGGTT CACCGTCCGC GCGGGTGCGG TCGTCGACGT CCCCGGCACC
GACCACCGCG CCGTCGTCGT CCGGGTCGCG CAGAGGTGA
|
|---|
| Protein sequence | MRSQSALGRS TASVPSGRVE RTRALGWIAV VVVAMAAVLS LATGVLGWSG EKGIAQVVAL
RTWLLWGFAS MAVVALLTAL VIGSRGRRPA RTISVALVCA LAAGSHLLVL DSRGLDAGLP
LDAADERDGD ITVLTANVRG ERAGEETVSA IVDLIISSGA DVVALPEGQP VVDEVVAQLI
GHGESFQSFP AFGAGPNRGT ALLVAESLGT YREVDGPVGG VRVVPVDGDG PPIAAVHPTS
LPPDPTADLG AWRSEGSQLR ALFRTMTGGI VAGDMNATLD HQQLRETGTY VDAGSAAGIG
GYGTFPSSLP GVLGTAIDHV LVDRGRFTVR AGAVVDVPGT DHRAVVVRVA QR
|
|---|
| |