Gene Sked_26810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_26810 
Symbol 
ID8634315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2990365 
End bp2992065 
Gene Length1701 bp 
Protein Length566 aa 
Translation table11 
GC content72% 
IMG OID 
Productbeta-1,4-xylanase 
Protein accessionYP_003315419 
Protein GI269795964 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.400635 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCCC TGACCGCGCG GCGCCGCGTG GCGAGCACTG CGGTCGTCGG TCTTCTCTGT 
GCCCTGGTGG GCTGCAGCCC GTCGGGCTCG CCGTCCGACG AGGGCACCGT CGTCGACCTG
CTGCAGCAGG ACTGGGAGCA CGTGCTCGGG GTCGTCGCGG ACGGCACAGG TCTGCGGGTG
ACGGCGACCG GGCGGAGCAT CGTCGAGCAG GACGGCGGGG GAGGCCAGCC AGACCCGCCG
GTCAACCTCG CGGGGACGCA CCTGGTCGCT CCGGAGGACT TCACGCTCCG CGCCTCGTTC
ACGGACGTGA CAGCCGACGC CACCCTGGTC GTCTACGACA GCCCGCCGGT GATCGCGGAC
GAGTTCCGGA TCGAGCCCGC GGCTCTCCAC CTCACGCTCC GTGGCGACGA CCTCCGGATC
GCCGTCTTCG ACGGCTCGCA CCCGCAGGAC GTGACCGACC CGCAGCCGGC CCACGACGAG
CACGTCACGG TCCTCGACAC CTCGGCGCCG CTCTCCGTGC ACCGTTCCGG CGACCTGCTC
GAGATCGCGA GCGACGGCGA GACGGTGTCG TCGCTGCCCC TCGGCGACGT CTTCGACTCC
GGTGAGCTCT GGCTGGGGTT GTCGAGCGAG GAGGGGGCCT TCACGGTCCG CTCGCTCGTG
GCCTCTGCGC CGAGCGGTGC GTCCCTGGCC ACCGCGGGTC CCGTCGCGGA CGACGCGGAA
CCGTCTCCGG ACGGTCTGCA GGCTCTGGCC GCCGGCTCCC GCCCGGACTT CCTCGTCGGC
GCTGCGGTAG CCCTCGGCCC GTTCGTCTCG GACGCGGAGT ACGCGAGCGC CGTCGTGGGC
GACTTCGGGG CACTCACCCC GGAGAACGCG ATGAAGCCGC AGGCGCTCTC CCCGCGGCAG
GGCGAGTACA CCTTCGAGGA GGCTGACGCC CTCCTCGACC TCGCGGAGAG CGCGGGGATC
GCCGTGCACG GCCACACCAT CGCCTTCACC GAGGCGATGC CGCGGTGGAT GCGTGAGCTT
CCCACCGGCA CCGAGCAGGA GCGCCAGGAG AGCGCCGACG CCCTGCTCGA CTACGTGACC
ACCGTCGTCA TGCACTTCCG GGGCCGGCTC GACTCGCTCG ACGTCGTCAA CGAACCGTTC
GACCTCGACC AGGGGACCAG CCTGCAGGAG AACGTCTGGT TCCGTGTCTT CGGGCCGACC
TACCCGGCGG TCGTCTCGCA GGCGGTGCAC GCCGCAGACC CGGACGTCAG GCAGTTCATC
AACGAGAACG GCGCCGACGT GCCGGGTCCC CGACAGGACG CCCTGCTCCA GCTCGCCCTC
GACACGAACG CGCAGGGTGG GCACATCGAC GGCGTGGGCC TCCAGGCTCA CGTCTACGAG
CTCGACACCG ACGCCCTCTC GGCCGGCGAT CTCGCGACGA CCTTCGCCAG CGTCGAGGAC
GCCGGGCTGC TCGTCAGGAT CTCCGAGAAC GACGTCACGG ACAGCGAGGG CCAGGCCGTC
CAGGCGGAGC AGTACGCCAC GGTGCTCGCC GCCTGCCTCC GCTCGGACAC CTGCGTCTCC
TACACGACGT GGGGAGTGGA CGACACGTAC GACTGGTGGG TCGACGACGA CGGGGCCCTC
CAGCAGGGCC ACGACCTCCT GCTCGACGAC GGAGAACCGA CGCCTGCGTC CGACGCGCTG
AGAGAGGTCC TCGCGGGCTG A
 
Protein sequence
MAALTARRRV ASTAVVGLLC ALVGCSPSGS PSDEGTVVDL LQQDWEHVLG VVADGTGLRV 
TATGRSIVEQ DGGGGQPDPP VNLAGTHLVA PEDFTLRASF TDVTADATLV VYDSPPVIAD
EFRIEPAALH LTLRGDDLRI AVFDGSHPQD VTDPQPAHDE HVTVLDTSAP LSVHRSGDLL
EIASDGETVS SLPLGDVFDS GELWLGLSSE EGAFTVRSLV ASAPSGASLA TAGPVADDAE
PSPDGLQALA AGSRPDFLVG AAVALGPFVS DAEYASAVVG DFGALTPENA MKPQALSPRQ
GEYTFEEADA LLDLAESAGI AVHGHTIAFT EAMPRWMREL PTGTEQERQE SADALLDYVT
TVVMHFRGRL DSLDVVNEPF DLDQGTSLQE NVWFRVFGPT YPAVVSQAVH AADPDVRQFI
NENGADVPGP RQDALLQLAL DTNAQGGHID GVGLQAHVYE LDTDALSAGD LATTFASVED
AGLLVRISEN DVTDSEGQAV QAEQYATVLA ACLRSDTCVS YTTWGVDDTY DWWVDDDGAL
QQGHDLLLDD GEPTPASDAL REVLAG