| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_26810 |
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| Symbol | |
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| ID | 8634315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | - |
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| Start bp | 2990365 |
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| End bp | 2992065 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | beta-1,4-xylanase |
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| Protein accession | YP_003315419 |
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| Protein GI | 269795964 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.400635 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCCC TGACCGCGCG GCGCCGCGTG GCGAGCACTG CGGTCGTCGG TCTTCTCTGT
GCCCTGGTGG GCTGCAGCCC GTCGGGCTCG CCGTCCGACG AGGGCACCGT CGTCGACCTG
CTGCAGCAGG ACTGGGAGCA CGTGCTCGGG GTCGTCGCGG ACGGCACAGG TCTGCGGGTG
ACGGCGACCG GGCGGAGCAT CGTCGAGCAG GACGGCGGGG GAGGCCAGCC AGACCCGCCG
GTCAACCTCG CGGGGACGCA CCTGGTCGCT CCGGAGGACT TCACGCTCCG CGCCTCGTTC
ACGGACGTGA CAGCCGACGC CACCCTGGTC GTCTACGACA GCCCGCCGGT GATCGCGGAC
GAGTTCCGGA TCGAGCCCGC GGCTCTCCAC CTCACGCTCC GTGGCGACGA CCTCCGGATC
GCCGTCTTCG ACGGCTCGCA CCCGCAGGAC GTGACCGACC CGCAGCCGGC CCACGACGAG
CACGTCACGG TCCTCGACAC CTCGGCGCCG CTCTCCGTGC ACCGTTCCGG CGACCTGCTC
GAGATCGCGA GCGACGGCGA GACGGTGTCG TCGCTGCCCC TCGGCGACGT CTTCGACTCC
GGTGAGCTCT GGCTGGGGTT GTCGAGCGAG GAGGGGGCCT TCACGGTCCG CTCGCTCGTG
GCCTCTGCGC CGAGCGGTGC GTCCCTGGCC ACCGCGGGTC CCGTCGCGGA CGACGCGGAA
CCGTCTCCGG ACGGTCTGCA GGCTCTGGCC GCCGGCTCCC GCCCGGACTT CCTCGTCGGC
GCTGCGGTAG CCCTCGGCCC GTTCGTCTCG GACGCGGAGT ACGCGAGCGC CGTCGTGGGC
GACTTCGGGG CACTCACCCC GGAGAACGCG ATGAAGCCGC AGGCGCTCTC CCCGCGGCAG
GGCGAGTACA CCTTCGAGGA GGCTGACGCC CTCCTCGACC TCGCGGAGAG CGCGGGGATC
GCCGTGCACG GCCACACCAT CGCCTTCACC GAGGCGATGC CGCGGTGGAT GCGTGAGCTT
CCCACCGGCA CCGAGCAGGA GCGCCAGGAG AGCGCCGACG CCCTGCTCGA CTACGTGACC
ACCGTCGTCA TGCACTTCCG GGGCCGGCTC GACTCGCTCG ACGTCGTCAA CGAACCGTTC
GACCTCGACC AGGGGACCAG CCTGCAGGAG AACGTCTGGT TCCGTGTCTT CGGGCCGACC
TACCCGGCGG TCGTCTCGCA GGCGGTGCAC GCCGCAGACC CGGACGTCAG GCAGTTCATC
AACGAGAACG GCGCCGACGT GCCGGGTCCC CGACAGGACG CCCTGCTCCA GCTCGCCCTC
GACACGAACG CGCAGGGTGG GCACATCGAC GGCGTGGGCC TCCAGGCTCA CGTCTACGAG
CTCGACACCG ACGCCCTCTC GGCCGGCGAT CTCGCGACGA CCTTCGCCAG CGTCGAGGAC
GCCGGGCTGC TCGTCAGGAT CTCCGAGAAC GACGTCACGG ACAGCGAGGG CCAGGCCGTC
CAGGCGGAGC AGTACGCCAC GGTGCTCGCC GCCTGCCTCC GCTCGGACAC CTGCGTCTCC
TACACGACGT GGGGAGTGGA CGACACGTAC GACTGGTGGG TCGACGACGA CGGGGCCCTC
CAGCAGGGCC ACGACCTCCT GCTCGACGAC GGAGAACCGA CGCCTGCGTC CGACGCGCTG
AGAGAGGTCC TCGCGGGCTG A
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| Protein sequence | MAALTARRRV ASTAVVGLLC ALVGCSPSGS PSDEGTVVDL LQQDWEHVLG VVADGTGLRV
TATGRSIVEQ DGGGGQPDPP VNLAGTHLVA PEDFTLRASF TDVTADATLV VYDSPPVIAD
EFRIEPAALH LTLRGDDLRI AVFDGSHPQD VTDPQPAHDE HVTVLDTSAP LSVHRSGDLL
EIASDGETVS SLPLGDVFDS GELWLGLSSE EGAFTVRSLV ASAPSGASLA TAGPVADDAE
PSPDGLQALA AGSRPDFLVG AAVALGPFVS DAEYASAVVG DFGALTPENA MKPQALSPRQ
GEYTFEEADA LLDLAESAGI AVHGHTIAFT EAMPRWMREL PTGTEQERQE SADALLDYVT
TVVMHFRGRL DSLDVVNEPF DLDQGTSLQE NVWFRVFGPT YPAVVSQAVH AADPDVRQFI
NENGADVPGP RQDALLQLAL DTNAQGGHID GVGLQAHVYE LDTDALSAGD LATTFASVED
AGLLVRISEN DVTDSEGQAV QAEQYATVLA ACLRSDTCVS YTTWGVDDTY DWWVDDDGAL
QQGHDLLLDD GEPTPASDAL REVLAG
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