| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_26800 |
|---|
| Symbol | |
|---|
| ID | 8634314 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 2989800 |
|---|
| End bp | 2990327 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding |
|---|
| Protein accession | YP_003315418 |
|---|
| Protein GI | 269795963 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.30871 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGACG TCTCCCCGAA CGAGCTCCTG CTCCTCGCCC TGCTCAACTC GACCCCCCGA
GAGGGCGACG AGATCGTCGA CGCCCTGGGC GACGACGCGG GCGCCGCCAC CTGGACCCTG
GAGCACGGTG GCACCGGGAC GCTCCGCGAG GTGGGGCTGG TCCGCGAGGT CCGCGAGGCG
CTCCAGGGAG TCGTCCGCGG AGACGCCGGA CCTCAGTCGC TCGCCCCGTT CCTCCGAGAC
GTCAGCCAGG TCCCGACGAT CACCTCGGTC ACCCTGCAGT GGCAGCTGCA GGCGCCCGAC
GACAGCCTCC TCGCCGCCCG CGCCGTCATC GCCTGGAGCG AGCTCGAGCA GACCCGACCG
GGCAGGCTCC GCTCGTGCGG CAACCCCGAC TGCCGCCTGT TCCTCGTCGA CCGCAGCCAC
GGCAACCGTG CGCAGTGGTG CTCGATGGCC GTCTGCGGGA ACCGCATGAA GGCGCGTCGC
CACTACGACC GGAAGCGCGA GGCCACCGCC GTCCCGCCGG CGCCCTAG
|
|---|
| Protein sequence | MVDVSPNELL LLALLNSTPR EGDEIVDALG DDAGAATWTL EHGGTGTLRE VGLVREVREA
LQGVVRGDAG PQSLAPFLRD VSQVPTITSV TLQWQLQAPD DSLLAARAVI AWSELEQTRP
GRLRSCGNPD CRLFLVDRSH GNRAQWCSMA VCGNRMKARR HYDRKREATA VPPAP
|
|---|
| |