Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_26410 |
Symbol | |
ID | 8634275 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 2941213 |
End bp | 2942517 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003315379 |
Protein GI | 269795924 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0823467 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.277767 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGATCT TCTGGTGTGC CCTGACCGCG CTCGTGGGCC TCGTGCTCGG GTACGGCCTC GCCGTCGCCC GGTCAGGCTC ACGCCTGCGC GCCGGTGAGG TCGCGGTGGC GCGCGCCGAG GCCGAGCTGG CCGCCGAGCG CCGTGGCGCG GGCGAGCGGC TGCTCGCCAT GCAGCACGAC CAGGACCGCC TCTCCGACCA GTTCCGTGCC CTGGCGGCCG ACGCGCTGGC GTCGAACAAC GAGCAGTTCC TGGGGCTCGC CGAGCAGCGT CTGCGGTCGA CGCAGGTGGC CGGTCAGGCG GACCTCGCGG CGCGCACCGA GGCGGTGCAG CAGCTGGTCG CCCCGCTCAC CCGCTCGCTG AGCGACGTGC GCCAGCAGAT GCAGGTCGCC GAGGAGGCGC GGATCGCGAG CACGTCCGCG CTCGCCGAGC AGGTCCGCGG GATGCGGGAC GCCTCCGAGC TCCTGCGCTC CCAGACGAGC TCCCTCGTGT CCGCGCTGCG CACCTCGGAC GTGCGGGGCG CCTGGGGCGA GATGCAGCTG CGCCGCGTGG TCGAGGTCGC GGGGATGCTC AACCGCGTCG ACTTCGTCGA GCAGAGCCAC GTGTCGACCG ACGACGGGGC GCTGCGCCCC GACATGGTGG TGCACCTCGC CGGCGGGAAG AACATCGTCG TCGACGCGAA GGTCGCCTTC CTCGGGTACC TCGACGCGCA GCAGGCCACC GACCCCGGCT ACCGGGCGGA GCGGCTCGCC GCGCACGCCC GCCACGTCCG CAAGCACATC GACGACCTCG GCTCGAAGCG GTACTGGGAC CAGTTCGCCC CGAGCCCCGA GTTCGTCGTG ATGTTCATCC CGGCCGAGCC GTTCCTCGCG GCGGCCGTCG AGGAAGACCC GTCGCTGCTC GAGTACGCCT TCGGCCGGAA CGTGGTCATC GTGACCCCGA TGACGCTCAT GGCGCTGCTC CGCACGGTCT CGTACGCGTG GCGCCAGGAA GCCCTCGCGG AGAACGCGCA GAAGGTGCTC GAGGTGGGCA AGGAGCTGCA CGGTCGCCTC GCGACGATGG GCAGCCACCT GACCCGGCTC GGCAAGCAGA TCCAGGGTGC CGCCGACGCC TACAACAAGA CCGTGGCGTC CCTCGAGACG CGCGTGCTCG TGAGCGCCCG ACGGTTCGCC GAGCTCGACG TGGTCGACGG CGACCTCGAG ACCCCGCCGC CGGTCAGCCC GCACCTGGGT GTGGTGAGCG CACCCGAGCT CCTCGCGTCG GTCGACGAGT CCCTCGTCGA CCTCGAAGAC CTCAGACGGG GTTGA
|
Protein sequence | MTIFWCALTA LVGLVLGYGL AVARSGSRLR AGEVAVARAE AELAAERRGA GERLLAMQHD QDRLSDQFRA LAADALASNN EQFLGLAEQR LRSTQVAGQA DLAARTEAVQ QLVAPLTRSL SDVRQQMQVA EEARIASTSA LAEQVRGMRD ASELLRSQTS SLVSALRTSD VRGAWGEMQL RRVVEVAGML NRVDFVEQSH VSTDDGALRP DMVVHLAGGK NIVVDAKVAF LGYLDAQQAT DPGYRAERLA AHARHVRKHI DDLGSKRYWD QFAPSPEFVV MFIPAEPFLA AAVEEDPSLL EYAFGRNVVI VTPMTLMALL RTVSYAWRQE ALAENAQKVL EVGKELHGRL ATMGSHLTRL GKQIQGAADA YNKTVASLET RVLVSARRFA ELDVVDGDLE TPPPVSPHLG VVSAPELLAS VDESLVDLED LRRG
|
| |